| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 338497 = | 21 (0.690) | 6 (0.210) | 3/192 | 2.5 | 22.9% | coding (248/969 nt) | h16_B0302 | probable extra‑cytoplasmic solute receptor |
| ? | AM260480 | 338551 = | 21 (0.750) | coding (302/969 nt) | h16_B0302 | probable extra‑cytoplasmic solute receptor | |||||
AGGATGAGCGGCGCCTCGCCGAGCAGTGAAACCGGCGTGAAGTCGCGCAACACATCATATGGCATCTGGCGGAACACCGACGGCGCCACGGTATGAGCCAGCTCGATGACGCCCAGCGTGTAGCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/338626‑338497‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtcggTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTGCGGACT > AM260480/338551‑338682 AGGATGAGCGGCGCCTCGCCGAGCAGTGAAACCGGCGTGAAGTCGCGCAACACATCATATGGCATCTGGCGGAACACCGACGGCGCCACGGTATGAGCCAGCTCGATGACGCCCAGCGTGTAG < 2:716951/123‑1AGGATGAGCGGCGCCTCGCCGAGCAGTGAAACCGGCGTGAAGTCGCGCAACACATCATATGGCATCTGGCGGAACACCGACGGCGCCACGGTATGAGCCAGCTCGATGACGCCCAGCGTGTAG > 1:716951/1‑123 GGATGAGCGGCGCCTCGCCGAGCAGTGAAACCGGCGTGAAGTCGCGCAACACATCATATGGCATCTGGCGGAACACCGACGGCGCCACGGTATGAGCCAGCTCGATGACGCCCAGCGTGTAGCCGTCGGTGTTC < 1:375833/134‑1 GGATGAGCGGCGCCTCGCCGAGCAGTGAAACCGGCGTGAAGTCGCGCAACACATCATATGGCATCTGGCGGAACACCGACGGCGCCACGGTATGAGCCAGCTCGATGACGCCCAGCGTGTAGCCGTCGGTGTTC < 1:562828/134‑1 GCTCGATGACGCCCAGCGTGTAGCCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTC < 2:86626/110‑1 GCTCGATGACGCCCAGCGTGTAGCCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTC > 1:86626/1‑110 GCTCGATGACGCCCAGCGTGTAGCCGTCGGTGTTC < 1:474200/35‑1 GCTCGATGACGCCCAGCGTGTAGCCGTCGGTGTTC > 2:474200/1‑35 GCCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTG > 2:170124/1‑134 GCCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTG > 2:676734/1‑134 GCCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTG > 2:430079/1‑134 GCCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCG < 1:752471/89‑1 GCCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCG > 2:752471/1‑89 CCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTGC < 1:170124/134‑1 CCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCT < 2:375061/131‑1 CCGTCGGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCT > 1:375061/1‑131 GGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTGCGGACT < 2:375833/134‑1 GGTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTGCGGACT < 1:676734/134‑1 AGGATGAGCGGCGCCTCGCCGAGCAGTGAAACCGGCGTGAAGTCGCGCAACACATCATATGGCATCTGGCGGAACACCGACGGCGCCACGGTATGAGCCAGCTCGATGACGCCCAGCGTGTAGCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/338626‑338497‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgtcggTGTTCCGCCAGATGCCATATGATGTGTTGCGCGACTTCACGCCGGTTTCACTGCTCGGCGAGGCGCCGCTCATCCTGTTCGCGGACAGCACGCACTATCGCGCTGGCGACGTCCAGCGCTTCCTTGCGGACT > AM260480/338551‑338682 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |