| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM260480 | 2,256,779 | G→A | P94S (CCG→TCG) | h16_B1998 ← | transcriptional regulator, XRE‑family |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM260480 | 2,256,779 | 0 | G | A | 100.0% | 105.3 / NA | 28 | P94S (CCG→TCG) | h16_B1998 | transcriptional regulator, XRE‑family |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (14/14); total (14/14) | |||||||||||
CCATTGGCTGGTCTTGTGCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGGAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACGTCGAGGGCCTCGGCCAGCTTGAGCACCGTACCGATGGTCGGC > AM260480/2256653‑2256897 | ccATTGGCTGGTCTTGTGCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCgg < 2:1128013/134‑1 (MQ=255)ccATTGGCTGGTCTTGTGCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCgg < 2:1077678/134‑1 (MQ=255) ttGGCTGGTCTTGTGCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTcc < 2:837117/134‑1 (MQ=255) tGGCTGGTCTTGTGCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCcg > 1:134397/1‑134 (MQ=255) tCTTGTGCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCtt < 1:621024/134‑1 (MQ=255) tgCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACca < 1:258484/134‑1 (MQ=255) gAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGAc < 1:1028256/123‑1 (MQ=255) gAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGAc > 2:1028256/1‑123 (MQ=255) gAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACca > 1:1134434/1‑125 (MQ=255) gAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACca < 2:1134434/125‑1 (MQ=255) cTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGa < 2:134397/134‑1 (MQ=255) gCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCgg > 1:1031336/1‑78 (MQ=255) gCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCgg < 2:1031336/78‑1 (MQ=255) gTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTc > 2:1054763/1‑132 (MQ=255) gTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTc < 1:1054763/132‑1 (MQ=255) gTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGa > 1:358015/1‑134 (MQ=255) tCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGAc < 2:358015/134‑1 (MQ=255) cgcgCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGt > 2:618660/1‑133 (MQ=255) cTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCAtt > 1:867179/1‑93 (MQ=255) cTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCAtt < 2:867179/93‑1 (MQ=255) tCCGTGGCAATGGCTTCGTA‑GTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACGTc > 2:719934/1‑133 (MQ=255) ggCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACg > 1:34745/1‑127 (MQ=255) ggCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACg < 2:34745/127‑1 (MQ=255) ggTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACGTCGAGGGCCTCGGCCAGCtt > 2:655708/1‑132 (MQ=255) cTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTgg < 2:120139/85‑1 (MQ=255) cTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTgg > 1:120139/1‑85 (MQ=255) cTCGGCGGACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACGTCGAGGGCCTCGGCCAGCTTGAGCACCGTACCGATgg > 1:670187/1‑134 (MQ=255) ggACGGGCTGAACGAAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACGTCGAGGGCCTCGGCCAGCTTGAGCACCGTACCGATGGTCGGc > 1:250262/1‑133 (MQ=255) | CCATTGGCTGGTCTTGTGCCAGCGTGAACGGCGGCACCATGACGAAGGGCTGCATCGCCTTGTCCACGCGCTCCGTGGCAATGGCTTCGTAGGTATAGCCCTGGCGCTCGGCGGACGGGCTGAACGGAACCCGGTCCGCGGCCTTGACCAGCAGGATCTCATTGCCGCGCTGCGGCTTGGCGATCAGCTGGTCGACGGTCACGTCGAGGGCCTCGGCCAGCTTGAGCACCGTACCGATGGTCGGC > AM260480/2256653‑2256897 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |