Predicted mutation
evidence seq id position mutation annotation gene description
RA AM260479 637,111 +G intergenic (‑164/+218) adk ← / ← kdsB adenylate kinase/3‑Deoxy‑manno‑octulosonate cytidylyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AM260479637,1071.G100.0% 137.7 / NA 36intergenic (‑160/+222)adk/kdsBadenylate kinase/3‑Deoxy‑manno‑octulosonate cytidylyltransferase
Reads supporting (aligned to +/- strand):  ref base . (0/0);  new base G (15/21);  total (15/21)

GGCGGGAGATCAGAAGGAGGGTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATGCCGGCCGGGCGGCTCTGTATCGGCAAG  >  AM260479/636978‑637214
                                                                                                                                  |                                                                                                           
ggCGGGAGATCAGAAGGAGGGTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAgggg                                                                                                         >  2:981993/1‑134 (MQ=255)
ggCGGGAGATCAGAAGGAGGGTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAgggg                                                                                                         >  1:373901/1‑134 (MQ=255)
 gCGGGAGATCAGAAGGAGGGTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAgggg                                                                                                         >  2:503711/1‑133 (MQ=255)
         tCAGAAGGAGGGTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATggcggc                                                                                                 >  2:1047006/1‑134 (MQ=255)
                  gggTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        <  1:655371/134‑1 (MQ=255)
                  gggTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        <  1:503711/134‑1 (MQ=255)
                        cGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACg                                                                                  <  1:919861/134‑1 (MQ=255)
                                 ttGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATc                                                                         >  1:911640/1‑134 (MQ=255)
                                   gACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCt                                                                        <  2:225011/133‑1 (MQ=255)
                                           aCTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTccc                                                               <  1:611506/134‑1 (MQ=255)
                                                cTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCTCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCg                                                          <  1:981993/134‑1 (MQ=255)
                                                cTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCg                                                          <  2:373901/134‑1 (MQ=255)
                                                   cGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATc                                                                         <  1:355676/116‑1 (MQ=255)
                                                   cGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATc                                                                         <  1:1016964/116‑1 (MQ=255)
                                                   cGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATc                                                                         >  2:355676/1‑116 (MQ=255)
                                                   cGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATc                                                                         >  2:1016964/1‑116 (MQ=255)
                                                         tGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGgcggcgcg                                                                                              >  1:374771/1‑89 (MQ=255)
                                                         tGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGgcggcgcg                                                                                              <  2:374771/89‑1 (MQ=255)
                                                            tGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACg                                                                                  >  2:845960/1‑98 (MQ=255)
                                                            tGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACg                                                                                  <  1:845960/98‑1 (MQ=255)
                                                                    gACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        <  2:774185/84‑1 (MQ=255)
                                                                    gACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        >  1:774185/1‑84 (MQ=255)
                                                                    gACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGc                                      >  1:735611/1‑134 (MQ=255)
                                                                             cAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCg                                                          <  1:1144152/105‑1 (MQ=255)
                                                                             cAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCg                                                          >  2:1144152/1‑105 (MQ=255)
                                                                                  cgGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATgccggc                        <  2:735611/134‑1 (MQ=255)
                                                                                  cgGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATgccggc                        <  1:1047006/134‑1 (MQ=255)
                                                                                       aCTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        >  2:1084449/1‑65 (MQ=255)
                                                                                       aCTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        <  1:1084449/65‑1 (MQ=255)
                                                                                       aCTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTa                                                                           <  1:679149/78‑1 (MQ=255)
                                                                                       aCTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTa                                                                           >  2:679149/1‑78 (MQ=255)
                                                                                           cTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATGCCGGCCGggcggc                <  1:12767/133‑1 (MQ=255)
                                                                                              aGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        <  2:1180179/58‑1 (MQ=39)
                                                                                              aGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCacac                                                                                        >  1:1180179/1‑58 (MQ=255)
                                                                                                         cGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTTGCCGGAGGCACGCTTGCGCATgccggc                        >  2:119141/1‑111 (MQ=255)
                                                                                                         cGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATgccggc                        <  1:119141/111‑1 (MQ=255)
                                                                                                         cGCATACGGCCGGCGGCGGCTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATGCCGGCCGGGCGGCTCTGTATCGGCAAg  >  1:217089/1‑133 (MQ=255)
                                                                                                                        gcggcTGCCAGGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATGCCGGCCGggc                   >  2:1160956/1‑101 (MQ=255)
                                                                                                                        gcggcTGCCAGGGGGATGGCGGCGCAGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATGCCGGCCGggc                   <  1:1160956/101‑1 (MQ=255)
                                                                                                                                  |                                                                                                           
GGCGGGAGATCAGAAGGAGGGTAACGCCGTAACTTGACGCAGGACTTACTGCGGTCCTGATGCGTTCTGACTGCGTTCAGCGCGGGCACTGCTCAGGCGTACCCACGCATACGGCCGGCGGCGGCTGCCAGGGGATGGCGGCGCGGCACACCGGACGGGCTCTATCTTTATCTCCCCACCGAGCCTTGGCCGGAGGCACGCTTGCGCATGCCGGCCGGGCGGCTCTGTATCGGCAAG  >  AM260479/636978‑637214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: