New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AM260479 | 382098 = | 12 (0.450) | 4 (0.160) | 4/196 | 2.0 | 21.4% | coding (171/1548 nt) | h16_A0364 | Predicted Zn‑dependent peptidase, M16B subfamily |
? | AM260479 | 382162 = | 18 (0.720) | coding (235/1548 nt) | h16_A0364 | Predicted Zn‑dependent peptidase, M16B subfamily |
GCCGGCCGGGGCGGTCTGCGTGCCGGGCATCGGCGAAGCCACCACGCCCTGCGCCCCTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/382161‑382098 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcGCGACCGCGCATGGCACGACCGAATACCGCCTGTCCAACGGGCTGCGGCTGATCGTCAAGGAAGACCACCGCGCGCCCACGGTGGCG > AM260479/382162‑382248 GCCGGCCGGGGCGGTCTGCGTGCCGGGCATCGGCGAAGCCACCACGCCCTGCGCCCCTGCCGGCGCGACCGCGCATGGCACGACCGAATACCGCCTGTCCAACGGGCTGCGGCTGATCGTCAAGGAAGACCACC > 1:584567/1‑134 CGGTCTGCGTGCCGGGCATCGGCGAAGCCACCACGCCCTGCGCCCCTGCCGGCGCGACCGCGCATGGCACGACCGAATACCGCCTGTCCAACGGGCTGCGGCTGATCGTCAAGGAAGACCACCGCGCGCCCACG < 2:584567/134‑1 CGGCGAAGCCACCACGCCCTGCGCCCCTGCCGGCGCGACCGCGCATGGCACGACCGAATACCGCCTGTCCAACGGGCTGCGGCTGATCGTCAAGGAAGACCACCGCGCGCCCACGGTGGCG < 1:383345/121‑1 CGGCGAAGCCACCACGCCCTGCGCCCCTGCCGGCGCGACCGCGCATGGCACGACCGAATACCGCCTGTCCAACGGGCTGCGGCTGATCGTCAAGGAAGACCACCGCGCGCCCACGGTGGCG > 2:383345/1‑121 GCCGGCCGGGGCGGTCTGCGTGCCGGGCATCGGCGAAGCCACCACGCCCTGCGCCCCTGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/382161‑382098 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcGCGACCGCGCATGGCACGACCGAATACCGCCTGTCCAACGGGCTGCGGCTGATCGTCAAGGAAGACCACCGCGCGCCCACGGTGGCG > AM260479/382162‑382248 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |