| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | 1182334 = | 16 (0.520) | 6 (0.210) | 5/192 | 2.0 | 28.7% | coding (776/972 nt) | h16_B1046 | Zn‑dependent hydrolase or glyoxylase |
| ? | AM260480 | 1182383 = | 15 (0.530) | coding (825/972 nt) | h16_B1046 | Zn‑dependent hydrolase or glyoxylase | |||||
GCCCAGTGCGCGTAGGGCTGCGGCACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGCCATTGCAGGTAGCCGCGCGTCTGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1182454‑1182334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcgaGGCCGCGGCGCAGGGGCGGGACCTGGCCGAGGTCATGGCGATGCCGGTGCCGCAGCCCTACGCGCACTGGGCCGCGATGCCCGCGGAGTACCTGCGCAACGTCGGCCATCTCTACCCTGCGCGTGAGGAAG > AM260480/1182383‑1182513 GCCCAGTGCGCGTAGGGCTGCGGCACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGCCATTGCAGGTAGCCGCGCGTCTGCGCGAG > 1:771642/1‑122GCCCAGTGCGCGTAGGGCTGCGGCACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGCCATTGCAGGTAGCCGCGCGTCTGCGCGAG < 2:771642/122‑1 GGCTGCGGCACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGCCATTGCAGGTAGCCGCGCGTCTGC < 1:916913/102‑1 GGCTGCGGCACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGCCATTGCAGGTAGCCGCGCGTCTGC > 2:916913/1‑102 ACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGCCATTGCAGGTAGCCGCGCGTCTGCGCGAG < 1:60646/98‑1 ACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGACATTGCAGGTGGCCGCGCGTCTGCGCGAG > 2:60646/1‑98 GGTAGCCGCGCGTCTGCGCGAGGCCGCGGCGCAGGGGCG > 1:622465/1‑39 GGTAGCCGCGCGTCTGCGCGAGGCCGCGGCGCAGGGGCG < 2:622465/39‑1 TGCGCGAGGCCGCGGCGCAGGGGCGGGACCTGGCCGAGGTCATGGCGATGCCGGTGCCGCAGCCCTACGCGCACTGGGCCGCGATGCCCGCGGAGTACCTGCGCAACGTCGGCCATCTCTACCCTGCGCGTGAG > 1:539941/1‑134 CGAGGCCGCGGCGCAGGGGCGGGACCTGGCCGAGGTCATGGCGATGCCGGTGCCGCAGCCCTACGCGCACTGGGCCGCGATGCCCGCGGAGTACCTGCGCAACGTCGGCCATCTCTACCCTGCGCGTGAGGAAG > 2:420174/1‑134 GCCCAGTGCGCGTAGGGCTGCGGCACCGGCATCGCCATGACCTCGGCCAGGTCCCGCCCCTGCGCCGCGGCCTCGCGCAGGCGCGTGTCCAGCCATTGCAGGTAGCCGCGCGTCTGCGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260480/1182454‑1182334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcgcgaGGCCGCGGCGCAGGGGCGGGACCTGGCCGAGGTCATGGCGATGCCGGTGCCGCAGCCCTACGCGCACTGGGCCGCGATGCCCGCGGAGTACCTGCGCAACGTCGGCCATCTCTACCCTGCGCGTGAGGAAG > AM260480/1182383‑1182513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |