New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AM260480 | = 645012 | 15 (0.490) | 5 (0.180) | 4/192 | 2.2 | 20.1% | coding (979/1332 nt) | h16_B0572 | Glucose/sorbosone dehydrogenase |
? | AM260480 | 645112 = | 26 (0.920) | coding (1079/1332 nt) | h16_B0572 | Glucose/sorbosone dehydrogenase |
AACGAGCGCGATGAAATCGGCAGCGACCTGGTGCCGGACTACATCACCTCGGTGCGCGACGGCGGCTTCTATGGCTGGCCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAACCTGCCGGCGCGCTTCAGCGAAGGCATGTTCGTGGGCCTGCACG > AM260480/644883‑645144 | aaCGAGCGCGATGAAATCGGCAGCGACCTGGTGCCGGACTACATCACCTCGGTGCGCGACGGCGGCTTCTATGGCTGGCCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGTCGCgcac < 2:522431‑M1/134‑5 (MQ=255) cGGACTACATCACCTCGGTGCGCGACGGCGGCTTCTATGGCTGGCCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGc < 1:735706/133‑1 (MQ=255) cGGACTACATCACCTCGGTGCGCGACGGCGGCTTCTATGGCTGGCCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGc > 2:735706/1‑133 (MQ=255) aCGGCGGCTTCTATGGCTGGCCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGcaca < 2:81130/123‑1 (MQ=255) aCGGCGGCTTCTATGGCTGGCCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGcaca > 1:81130/1‑123 (MQ=255) tggctggcCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGGCCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGgccgcc < 2:87438/133‑1 (MQ=255) tACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGT‑GGGGCGCACACCGCATCGCTCGGGCTGgccgc > 1:383842/1‑121 (MQ=255) tACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGT‑GGGGCGCACACCGCATCGCTCGGGCTGgccgc < 2:383842/121‑1 (MQ=255) gCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCgcttcagcgaaggcatgttcgtgggcctgcacggttcgtggaaccgcaggccgctggcgggctacaaggtgatcttcgtgc < 2:924865‑M1/126‑82 (MQ=255) gCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCgcttcagcgaaggcatgttcgtgggcctgcacggttcgtggaaccgcaggccgctggcgggctacaaggtgatcttcgtgc > 1:924865‑M1/1‑45 (MQ=255) ctactaCGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAAcc > 2:700653/1‑134 (MQ=255) tactacGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGgccgccg > 2:527802/1‑118 (MQ=255) tactacGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGgccgccg < 1:527802/118‑1 (MQ=255) cGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCgcttcagcga > 2:389858‑M1/1‑38 (MQ=255) cGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCgcttcagcga < 1:389858‑M1/48‑11 (MQ=255) cGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAACCTGCCgg > 1:76592/1‑134 (MQ=255) tCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAACCTGCCGGCGCGCTTCAGc > 2:548259/1‑134 (MQ=255) cgTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAACCTGCCGGCGCGCTTCAGCGAAGGCATGt > 2:45181/1‑134 (MQ=255) aaGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAACCTGCCGGCGCGCTTCAGCGAAGGCATGTTCGt > 2:835706/1‑134 (MQ=255) gccggACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAACCTGCCGGCGCGCTTCAGCGAAGGCATGTTCGTGGGCCTGCACg > 1:1135734/1‑134 (MQ=255) | AACGAGCGCGATGAAATCGGCAGCGACCTGGTGCCGGACTACATCACCTCGGTGCGCGACGGCGGCTTCTATGGCTGGCCCTACAGCTACTACGGCCAGCATGTCGACGCACGCGTGAAGCCGCCGGCGCCGGACCTGGTGGCCAGGGCCATCGTGCCGGACTATGCCGTGGGGGCGCACACCGCATCGCTCGGGCTGGCCGCCGCCGGCGGCAACAACCTGCCGGCGCGCTTCAGCGAAGGCATGTTCGTGGGCCTGCACG > AM260480/644883‑645144 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |