| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 738752 | 17 (0.640) | 6 (0.240) | 5/194 | 1.7 | 26.8% | coding (238/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase |
| ? | AM260479 | = 738783 | 17 (0.680) | coding (269/1086 nt) | h16_A0689 | predicted ornithine cyclodeaminase | |||||
CAAGTCCGCGCGGCTGGCGAGCCATTCCGCGCGTGGCGTGATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGCTGGCCGACCTGACGCTGGCCACTGCGCTGCGCACCGCGGCCACCTCGGCGCTGGCGGCGCGCGCCATGGCGCGGCCCGGTG > AM260479/738652‑738914 | cAAGTCCGCGCGGCTGGCGAGCCATTCCGCGCGTGGCGTGATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTga < 2:189496‑M2/134‑3 (MQ=255) gCTGGCGAGCCATTCCGCGCGTGGCGTGATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATggcctgcggcc > 1:748399/1‑134 (MQ=255) gCGAGCCATTCCGCGCGTGGCGTGATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCctgct < 2:633060/134‑1 (MQ=255) cGAGCCATTCCGCGCGTGGCGTGATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCctgctg < 1:1177124/134‑1 (MQ=255) tggcgtgATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCg < 1:189496/134‑1 (MQ=255) tggcgtgATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCg < 2:748399/134‑1 (MQ=255) gATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGc > 1:223841/1‑134 (MQ=255) aTGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGc < 2:210352/133‑1 (MQ=255) gCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCg > 2:598557/1‑108 (MQ=255) gCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCg < 1:598557/108‑1 (MQ=255) cGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGCTGGCCGACCTGa < 1:78274/134‑1 (MQ=255) ccATCCGCGCAATGCGCAGCATGGCATGCCGACGGTgatggccgttgacatacttgaacgcatactggatgccgtcgctgaccggcatcagctcgatcacgccacgc > 1:939980‑M2/1‑36 (MQ=255) ccATCCGCGCAATGCGCAGCATGGCATGCCGACGGTgatggccgttgacatacttgaacgcatactggatgccgtcgctgaccggcatcagctcgatcacgccacgc < 2:939980‑M2/107‑72 (MQ=255) cgcgCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGCTGGCCGACCTGACGCTGGCCACTGCGCTGCGCACCGCGGCCACCTCGGCGCTg > 2:166359/1‑134 (MQ=255) gcgcAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGCTGGCCGACCTGACGCTGGCCACTGCGCTGCGCACCGCGGCCACCTCGGCGCTgg > 2:957604/1‑134 (MQ=255) cgcAATGCGCAGCATGGCATGCCGACGGTgatggccgttgacatacttgaacgcatactggatgccgtcgctgaccggcatcagctcgatcacgccacgcgcggaatggctcgccagc < 1:751492‑M2/118‑90 (MQ=255) cgcAATGCGCAGCATGGCATGCCGACGGTgatggccgttgacatacttgaacgcatactggatgccgtcgctgaccggcatcagctcgatcacgccacgcgcggaatggctcgccagc > 2:751492‑M2/1‑29 (MQ=255) tgCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCg < 2:1010358/45‑1 (MQ=255) tgCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCg > 1:1010358/1‑45 (MQ=255) tgCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGCTGGCCGACCTGACGCTGGCCACTGCGCTGCGCACCGCGGCCACCTCGGCGCTGGCGGCGCGCGCCATGGCGCgg > 2:7768/1‑134 (MQ=255) aCGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGc < 1:1105595/55‑1 (MQ=255) aCGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGc > 2:1105595/1‑55 (MQ=255) ggTgatggccgttgacatacttgaacgcatactggatgccgtcgctgaccggcatcagctcgatcacgccacgcgcggaatggctcgccagccgcgcggacttgtcgaagtcgtgccagcgcagaaaggcctgc < 2:279763‑M2/134‑132 (MQ=255) ggTgatggccgttgacatacttgaacgcatactggatgccgtcgctgaccggcatcagctcgatcacgccacgcgcggaatggctcgccagccgcgcggacttgtcgaagtcgtgccagcgcagaaaggcctgc < 2:130920‑M2/134‑132 (MQ=255) | CAAGTCCGCGCGGCTGGCGAGCCATTCCGCGCGTGGCGTGATCGAGCTGATGCCGGTCAGCGACGGCATCCAGTATGCGTTCAAGTATGTCAACGGCCATCCGCGCAATGCGCAGCATGGCATGCCGACGGTGATGGCCTGCGGCCTGCTGGCCGAGGTGGAAACCGGCTTCCCGCTGATGCTGGCCGACCTGACGCTGGCCACTGCGCTGCGCACCGCGGCCACCTCGGCGCTGGCGGCGCGCGCCATGGCGCGGCCCGGTG > AM260479/738652‑738914 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |