| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AM260479 | 1,464,441 | Δ37 bp | coding (125‑161/552 nt) | h16_A1354 → | conserved hypothetical protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AM260479 | 1464441 | 1464477 | 37 | 33 [1] | [0] 33 | h16_A1354 | conserved hypothetical protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | = 1464440 | 1 (0.040) | 32 (1.200) | 24/208 | 0.2 | 98.5% | coding (124/552 nt) | h16_A1354 | conserved hypothetical protein |
| ? | AM260479 | 1464478 = | 0 (0.000) | coding (162/552 nt) | h16_A1354 | conserved hypothetical protein | |||||
CCGTCCAGCAGTGCCGCCACACGAGCACCTGGCTGCCTCTGGCATTGCGGCCATGAGCAACCGGTGCAAGGTCGACAACTGCTGGTGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGGCCGCGCCGCCACC > AM260479/1464356‑1464611 | tgcacgcctgtgacctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGc > 1:522111‑M2/123‑134 (MQ=255) cctgtgacctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTgcggc < 1:1041529‑M2/18‑1 (MQ=255) gtgacctgtgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGcc > 1:431583‑M2/114‑134 (MQ=255) tgtcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGt < 2:431583‑M2/28‑1 (MQ=255) tcatcagctggtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTAc > 1:500094‑M2/104‑133 (MQ=255) gtgggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACgg > 1:409012‑M2/94‑133 (MQ=255) gggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCAt > 2:791344‑M2/92‑134 (MQ=255) ggcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCAtt < 2:500094‑M2/44‑1 (MQ=255) gcgaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTg > 2:210845‑M2/90‑134 (MQ=255) gaaccgtccagcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTggg < 1:791344‑M2/47‑1 (MQ=255) agcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGAt < 2:410620‑M2/26‑1 (MQ=255) agcgtgccgccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGAt > 1:410620‑M2/79‑104 (MQ=255) ccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAg < 1:614556‑M2/51‑1 (MQ=255) ccacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAg > 2:614556‑M2/70‑120 (MQ=255) cacacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTgg < 1:210845‑M2/66‑1 (MQ=255) acacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGc > 1:530119‑M2/68‑134 (MQ=255) acacgagcacctggctgcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGc > 2:822870‑M2/68‑134 (MQ=255) gcctctggcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGccc > 1:839508‑M2/52‑134 (MQ=255) gcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGAc < 2:522111‑M2/90‑1 (MQ=255) gcattgcggccatgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGAc < 1:810924‑M2/90‑1 (MQ=255) catgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGAc > 1:1006124‑M2/35‑124 (MQ=255) catgagcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGAc < 2:1006124‑M2/90‑1 (MQ=255) agcaaccggtgcaaggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATg < 1:822870‑M2/103‑1 (MQ=255) aggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAgg > 2:413890‑M2/18‑133 (MQ=255) ggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGAt < 2:1170912‑M2/26‑1 (MQ=255) ggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGc > 1:1064698‑M2/17‑83 (MQ=255) ggtcgacagccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCa < 2:839508‑M2/118‑1 (MQ=255) ggtcgacagccgctggCGCGGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGc < 2:1064698‑M2/67‑1 (MQ=255) ccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGgccgcgc > 2:562300‑M2/8‑134 (MQ=255) ccgctggCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGgccgcgc > 1:1175906‑M2/8‑134 (MQ=255) gCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGGCCGCGCCGCCAc < 2:414588‑M2/133‑1 (MQ=255) gCGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGGCCGCGCCGCCAc < 1:562300‑M2/133‑1 (MQ=255) cGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGGCCGCGCCGCCAcc > 1:406047/1‑134 (MQ=255) | CCGTCCAGCAGTGCCGCCACACGAGCACCTGGCTGCCTCTGGCATTGCGGCCATGAGCAACCGGTGCAAGGTCGACAACTGCTGGTGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGCTGCACGGGCTGCGGCGCCTGGATGTACCAGAGCACGGCATTGGGTGAGCCGCCGAATATGTGGCGAATGGGCCCGCGCCCGGTCGACTGGCCTGATAATGACGGCTGAGCAGGCATGGCCGCGCCGCCACC > AM260479/1464356‑1464611 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |