Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	55295	55329	35	6 [0]	[1] 3	h16_A0040	predicted membrane protein

TTGCTAATGGAACCTCGCGATCCTCGGCCCAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGA  >  AM260479/55214‑55294                                                                                 | ttGCTAATGGAACCTCGCGATCCTCGGCCCAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGa  <  1:100317/81‑1 (MQ=255) ttGCTAATGGAACCTCGCGATCCTCGGCCCAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGa  >  2:100317/1‑81 (MQ=255)                    aTCCTCGGCCCAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGa  >  1:1017906/1‑62 (MQ=255)                    aTCCTCGGCCCAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGa  <  2:1017906/62‑1 (MQ=255)                              cAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGa  >  1:67327/1‑52 (MQ=255)                              cAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGa  <  2:67327/52‑1 (MQ=255)                                                                                 | TTGCTAATGGAACCTCGCGATCCTCGGCCCAAGATCACCTCAAGTCAAACAAGCCGCATTAACCACCCCCACCGCCAACGA  >  AM260479/55214‑55294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑