Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	2154150	2154195	46	3 [1]	[0] 4	h16_A1978/h16_A1979	conserved hypothetical protein/conserved hypothetical protein

AGCGGGTGAAGCAAACATTGCTGGCAAACCGGCACAAGCCAGACGCGCTGGCAAAGCTACTGCTCGAACAGGAGGTCGTAGACCGCCCTTCGCTGGAGCTGTTGCTCAACGAAAAAGTTACCCCGCTTTCACC  >  AM260479/2154037‑2154169                                                                                                                 |                     aGCGGGTGAAGCAAACATTGCTGGCAAACCGGCACAAGCCAGACGCGCTGGCAAAGCTACTGCTCGAACAGGAGGTCGTAGACCGCCCTTCGCTGGAGCTGTTGCTCAACGAAAAAGTTACCCCGCTTTCAcc  <  1:1110080/133‑1 (MQ=255)       tGAAGCAAACATTGCTGGCAAACCGGCACAAGCCAGACGCGCTGGCAAAGCTACTGCTCGAACAGGAGGTCGTAGACCGCCCTTCGCTGGAGCTGTTGCTCAACGaa                      >  1:155638/1‑107 (MQ=255)       tGAAGCAAACATTGCTGGCAAACCGGCACAAGCCAGACGCGCTGGCAAAGCTACTGCTCGAACAGGAGGTCGTAGACCGCCCTTCGCTGGAGCTGTTGCTCAACGaa                      <  2:155638/107‑1 (MQ=255)                                                                                                                 |                     AGCGGGTGAAGCAAACATTGCTGGCAAACCGGCACAAGCCAGACGCGCTGGCAAAGCTACTGCTCGAACAGGAGGTCGTAGACCGCCCTTCGCTGGAGCTGTTGCTCAACGAAAAAGTTACCCCGCTTTCACC  >  AM260479/2154037‑2154169

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑