Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	3554407	3554427	21	3 [1]	[0] 4	h16_A3287	Hypothetical protein

AAGACCCGGCCCTATCTTGTCCTGTGCGGCCTGCTGCCGGTGCTGGCTGCCTGCAGCAGCACGCCGCAGCCGCCGCAGGTCACGCCGGTGAACGCCACCATCAAGCTTGGCCGCGTCACCGAGAAGACGTTCC  >  AM260479/3554284‑3554416                                                                                                                           |           aaGACCCGGCCCTATCTTGTCCTGTGCGGCCTGCTGCCGGTGCTGGCTGCCTGCAGCAGCACGCCGCAGCCGCCGCAGGTCACGCCGGTGAACGCCACCATCAAGCTTGGCCGCGTCACCGAGAAGACGTTcc  <  1:473276/133‑1 (MQ=255)                                       ggTGCTGGCTGCCTGCAGCAGCACGCCGCAGCCGCCGCAGGTCACGCCGGTGAACGCCACCATCAAGCTTGGCCGCGTCACCgag            >  1:954751/1‑85 (MQ=255)                                       ggTGCTGGCTGCCTGCAGCAGCACGCCGCAGCCGCCGCAGGTCACGCCGGTGAACGCCACCATCAAGCTTGGCCGCGTCACCgag            <  2:954751/85‑1 (MQ=255)                                                                                                                           |           AAGACCCGGCCCTATCTTGTCCTGTGCGGCCTGCTGCCGGTGCTGGCTGCCTGCAGCAGCACGCCGCAGCCGCCGCAGGTCACGCCGGTGAACGCCACCATCAAGCTTGGCCGCGTCACCGAGAAGACGTTCC  >  AM260479/3554284‑3554416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑