Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ AM260480 1319234 1319272 39 4 [0] [2] 3 h16_B1167/h16_B1168 Hypothetical protein/conserved hypothetical protein

AGTGCGGCCGCGCCAGGGTGGAAGGTCGGAAAGTCATGGTGTCAATCTCC  >  AM260480/1319184‑1319233
                                                 |
aGTGCGGCCGCGCCAGGGTGGAAGGTCGGAAAGTCATGGTGTCAATCTcc  >  1:419682/1‑50 (MQ=255)
aGTGCGGCCGCGCCAGGGTGGAAGGTCGGAAAGTCATGGTGTCAATCTcc  <  2:419682/50‑1 (MQ=255)
     ggCCGCGCCAGGGTGGAAGGTCGGAAAGTCATGGTGTCAATCTcc  >  1:454446/1‑45 (MQ=255)
     ggCCGCGCCAGGGTGGAAGGTCGGAAAGTCATGGTGTCAATCTcc  <  2:454446/45‑1 (MQ=255)
                                                 |
AGTGCGGCCGCGCCAGGGTGGAAGGTCGGAAAGTCATGGTGTCAATCTCC  >  AM260480/1319184‑1319233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: