Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1848005	1848019	15	2 [0]	[0] 2	h16_A1692/h16_A1693	conserved hypothetical protein/transcriptional regulator, LacI‑family

CAATCCCGCAGATTCCCTATGCAGCAGGCCCCGTGGATTCCCGGCGCACAAGCTTGATGGGCAGGATATCGTGGACAGGCGGCGTCAGTGC  >  AM260479/1848020‑1848110 |                                                                                           cAATCCCGCAGATTCCCTATGCAGCAGGCCCCGTGGATTCCCGGCGCACAAGCTTGATGGGCAGGATATCGTGGACAGGCGGCGTCAGTGc  >  1:815199/1‑91 (MQ=255) cAATCCCGCAGATTCCCTATGCAGCAGGCCCCGTGGATTCCCGGCGCACAAGCTTGATGGGCAGGATATCGTGGACAGGCGGCGTCAGTGc  <  2:815199/91‑1 (MQ=255) |                                                                                           CAATCCCGCAGATTCCCTATGCAGCAGGCCCCGTGGATTCCCGGCGCACAAGCTTGATGGGCAGGATATCGTGGACAGGCGGCGTCAGTGC  >  AM260479/1848020‑1848110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑