Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	3554487	3554545	59	2 [0]	[1] 3	h16_A3287	Hypothetical protein

CTGAGCCGGCTGTTCAACAAGCCCGCGCCGGTGCAGCAGGTGGACCTGTTCCAGTACAAGGTGCGAACCATGGACGGCACGATCGTGGCGGCCAACGCGCCGGCGGCGCCGGGGCTGGAGCCAGGCGCGTGCGT  >  AM260479/3554533‑3554666              |                                                                                                                         cTGAGCCGGCTGTTCAACAAGCCCGCGCCGGTGCAGCAGGTGGACCTGTTCCAGTACAAGGTGCGAACCATGGACGGCACGATCGTGGCGGCCAACGCGCCGGCGGCGCCGGGGCTGGAGCCAGGCgcgtgcgt  >  1:786913/1‑134 (MQ=255)              tCAACAAGCCCGCGCCGGTGCAGCAGGTGGACCTGTTCCAGTACAAGGTGCGAACCATGGACGGCACGATCGTGGCGGCCAACGCGCCGGCGGCGCCgg                        >  1:85278/1‑99 (MQ=255)              tCAACAAGCCCGCGCCGGTGCAGCAGGTGGACCTGTTCCAGTACAAGGTGCGAACCATGGACGGCACGATCGTGGCGGCCAACGCGCCGGCGGCGCCgg                        <  2:85278/99‑1 (MQ=255)              |                                                                                                                         CTGAGCCGGCTGTTCAACAAGCCCGCGCCGGTGCAGCAGGTGGACCTGTTCCAGTACAAGGTGCGAACCATGGACGGCACGATCGTGGCGGCCAACGCGCCGGCGGCGCCGGGGCTGGAGCCAGGCGCGTGCGT  >  AM260479/3554533‑3554666

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑