| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM260479 | 582,589 | T→G | H295Q (CAT→CAG) | h16_A0555 → | zinc metalloprotease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM260479 | 582,589 | 0 | T | G | 100.0% | 111.7 / NA | 29 | H295Q (CAT→CAG) | h16_A0555 | zinc metalloprotease |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base G (15/14); total (15/14) | |||||||||||
GCCATGGGCGGGCAGGGCGCGGCCATCGCCAACCAGCTGTCGTTCTCGCGCGGGGCCGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCATGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGACCTCCGAGCGGATT > AM260479/582473‑582691 | gCCATGGGCGGGCAGGGCGCGGCCATCGCCAACCAGCTGTCGTTCTCGCGCGGGGCCGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATttc < 1:379079/132‑1 (MQ=255) tCGTTCTCGCGCGGGGCCGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAAtt < 2:676608/133‑1 (MQ=255) tctcGCGCGGGGCCGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTc > 2:959936/1‑134 (MQ=255) cgGGGCCGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCt > 2:543253/1‑133 (MQ=255) ggCCGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTAtg < 1:959936/134‑1 (MQ=255) cGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGc > 1:1048970/1‑134 (MQ=255) gcgAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACt > 2:874211/1‑134 (MQ=255) gACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCt > 2:811485/1‑134 (MQ=255) ttCCAGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGACCTCCGAGCg > 2:265317/1‑134 (MQ=255) aGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGACCTCCGAGCGGAtt < 1:874211/134‑1 (MQ=255) aGATCCTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGACCTCCGAGCGGAtt < 2:308176/134‑1 (MQ=255) ccTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAAtt > 1:186317/1‑83 (MQ=255) ccTGACCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAAtt < 2:186317/83‑1 (MQ=255) aCCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGTAGCGCGCATCGGGGACcg > 2:867692/1‑70 (MQ=255) aCCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGTAGCGCGCATCGGGGACcg < 1:867692/70‑1 (MQ=255) aCCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGAcc > 1:940833/1‑114 (MQ=255) aCCGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGAcc < 2:940833/114‑1 (MQ=255) ccGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAAtt < 1:568497/78‑1 (MQ=255) ccGCGGCGGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAAtt > 2:568497/1‑78 (MQ=255) gcggcgGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTAtg < 2:433442/91‑1 (MQ=255) gcggcgGGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTAtg > 1:433442/1‑91 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAAtt > 1:598838/1‑75 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAAtt < 2:598838/75‑1 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTAtgtg < 2:303082/92‑1 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTAtgtg < 2:507526/92‑1 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTAtgtg > 1:507526/1‑92 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTAtgtg > 1:303082/1‑92 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGACCTCCGAGCGGAtt > 1:773524/1‑122 (MQ=255) cggcggGGTTTGACCCGCAGGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGACCTCCGAGCGGAtt < 2:773524/122‑1 (MQ=255) | GCCATGGGCGGGCAGGGCGCGGCCATCGCCAACCAGCTGTCGTTCTCGCGCGGGGCCGAGCGCGAGGCCGACCGGGTCGGCTTCCAGATCCTGACCGCGGCGGGGTTTGACCCGCATGGCATGCCCGATTTCTTCATGCGGCTGCAGCGCGCATCGGGGACCGCGGAAAATTCGGTCCCGTCTTATGTGCGGACTCACCCGCTGACCTCCGAGCGGATT > AM260479/582473‑582691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |