Predicted mutation
evidence seq id position mutation annotation gene description
RA AM260479 208,932 A→C H322Q (CAT→CAG h16_A0195 ← Putative GTPase (G3E family)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AM260479208,9320AC100.0% 182.9 / NA 48H322Q (CAT→CAGh16_A0195Putative GTPase (G3E family)
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base C (22/26);  total (22/26)

CAGGCAGTTCTCCAGGCCCTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCATGGAACACCACTTTGCGGTCAACACCGTCCATATATAGTACGCCCTTGTAGCGCAGCAGTTTTTCCCCGTATACGGCCAGGATGCCGGACAGGAATTCCTCCAGCTTGCCGTAGTGGAAGGGCTTGT  >  AM260479/208803‑209059
                                                                                                                                 |                                                                                                                               
caggcAGTTCTCCAGGCCCTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTgg                                                                                                                              >  1:1063317/1‑133 (MQ=255)
     aGTTCTCCAGGCCCTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAacac                                                                                                                         >  1:463691/1‑133 (MQ=255)
      gTTCTCCAGGCCCTTGAGGATGGCGTCGCAGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCAATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAAcacca                                                                                                                       <  2:389673/134‑1 (MQ=255)
                cccTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTc                                                                                                             >  1:472894/1‑134 (MQ=255)
                 ccTTTAGGATCGCGTCGCGGGGCAGGTCCACGCCGATGACCACCATGCGCGTGCCCGCGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  2:690919/134‑2 (MQ=255)
                 ccTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  2:69551/134‑2 (MQ=255)
                 ccTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  2:463691/134‑2 (MQ=255)
                 ccTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  2:1063317/134‑2 (MQ=255)
                     gAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTccac                                                                                                          <  1:315464/132‑4 (MQ=255)
                     gAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCac                                                                                                          <  1:382707/132‑1 (MQ=255)
                        gATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAacac                                                                                                                         >  2:624167/1‑114 (MQ=255)
                        gATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAacac                                                                                                                         <  1:624167/114‑1 (MQ=255)
                        gATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  1:146291/127‑2 (MQ=255)
                        gATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            >  2:146291/1‑126 (MQ=255)
                               tCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTccac                                                                                                          <  1:484057/122‑4 (MQ=255)
                               tCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTccac                                                                                                          >  2:484057/1‑119 (MQ=255)
                                 gcgGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCacac                                                                                                        >  2:1174902/1‑122 (MQ=255)
                                 gcgGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCacac                                                                                                        <  1:1174902/122‑1 (MQ=255)
                                 gcgGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCatatat                                                                                             <  2:516854/133‑1 (MQ=255)
                                 gcgGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCatatat                                                                                             <  2:968973/133‑1 (MQ=255)
                                                   gATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAacac                                                                                                                         <  2:1125631/87‑1 (MQ=255)
                                                   gATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAacac                                                                                                                         >  1:1125631/1‑87 (MQ=255)
                                                     tGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGTACGCCCTTGTAGCgcagc                                                                        <  2:472894/134‑1 (MQ=255)
                                                        acacCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAAcacca                                                                                                                       <  1:425131/84‑1 (MQ=255)
                                                        acacCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAAcacca                                                                                                                       >  2:425131/1‑84 (MQ=255)
                                                        acacCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            >  1:873835/1‑94 (MQ=255)
                                                        acacCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  1:1146226/95‑2 (MQ=255)
                                                        acacCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  2:873835/95‑2 (MQ=255)
                                                        acacCATGCGCGTGCCCGGGGTCTATTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGCGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            >  2:1146226/1‑94 (MQ=255)
                                                                cgcgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCatatat                                                                                             <  1:48706/102‑1 (MQ=255)
                                                                cgcgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCatatat                                                                                             >  2:48706/1‑102 (MQ=255)
                                                                cgcgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGTACGCCCTTGTAGCGCAGCAGTTTTTcccc                                                             >  2:281576/1‑134 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  2:362244/85‑2 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            >  1:362244/1‑84 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCac                                                                                                          <  1:991292/87‑1 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCac                                                                                                          >  2:991292/1‑87 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCatatat                                                                                             <  2:169003/100‑1 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCatatat                                                                                             >  1:169003/1‑100 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGt                                                                                          >  2:1142066/1‑103 (MQ=255)
                                                                  cgTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGt                                                                                          <  1:1142066/103‑1 (MQ=255)
                                                                                                 ccGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            >  1:828052/1‑53 (MQ=255)
                                                                                                 ccGATGTCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTcc                                                                                                            <  2:828052/54‑2 (MQ=255)
                                                                                                       tCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCcaca                                                                                                         >  2:280574/1‑51 (MQ=255)
                                                                                                       tCGCTGCCCATCAGCTGGTGGACCCCCTGGAACACCACTTTGCGGTCcaca                                                                                                         <  1:280574/51‑1 (MQ=255)
                                                                                                                    gCTGGTGGACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGTACGCCCTTGTAGCGCAGCAGTTTTTCCCCGTATACGGCCAGGATGCCGGACAGGAATTCCTCCAGCTTGCCGTAGTGGAAg         >  2:247345/1‑134 (MQ=255)
                                                                                                                           gACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGTACGCCCTTGTAGCGCAGCAGTTTTTCCCCGTATACGGCCAGGATGCCg                                          <  2:387275/94‑1 (MQ=255)
                                                                                                                           gACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGTACGCCCTTGTAGCGCAGCAGTTTTTCCCCGTATACGGCCAGGATGCCg                                          >  1:387275/1‑94 (MQ=255)
                                                                                                                           gACCCCCTGGAACACCACTTTGCGGTCCACACCGTCCATATATAGTACGCCCTTGTAGCGCAGCAGTTTTTCCCCGTATACGGCCAGGATGCCGGACAGGAATTCCTCCAGCTTGCCGTAGTGGAAGGGCTTGt  >  2:795784/1‑134 (MQ=255)
                                                                                                                                 |                                                                                                                               
CAGGCAGTTCTCCAGGCCCTTGAGGATGGCGTCGCGGGGCAGGTCCACGCCGATGAACACCATGCGCGTGCCCGGGGTCTCTTCCTCCCACTTGGCGCCGATGTCGCTGCCCATCAGCTGGTGGACCCCATGGAACACCACTTTGCGGTCAACACCGTCCATATATAGTACGCCCTTGTAGCGCAGCAGTTTTTCCCCGTATACGGCCAGGATGCCGGACAGGAATTCCTCCAGCTTGCCGTAGTGGAAGGGCTTGT  >  AM260479/208803‑209059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: