Predicted mutation
evidence seq id position mutation annotation gene description
RA AM260479 2,580,039 A→G R155R (CGT→CGC h16_A2375 ← Protein‑L‑isoaspartate carboxylmethyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AM2604792,580,0390AG100.0% 53.5 / NA 15R155R (CGT→CGCh16_A2375Protein‑L‑isoaspartate carboxylmethyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (8/7);  total (8/7)

GATGCGCTCGATCGAGAAGACCTCGCGCGCGACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCACGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGCGCGGCGTCCTCATACGCCT  >  AM260479/2579922‑2580127
                                                                                                                     |                                                                                        
gATGCGCTCGATCGAGAAGACCTCGCGCGCGACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCa                                                                          <  2:684078/134‑1 (MQ=255)
                         cgcgcgACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTgg                                                  >  1:945924/1‑133 (MQ=255)
                                                   cTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCtt                                                    <  1:1110435/105‑1 (MQ=255)
                                                   cTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCtt                                                    >  2:1110435/1‑105 (MQ=255)
                                                                        gATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGCGCGGCGTCCTCATACGCCt  >  2:540776/1‑134 (MQ=255)
                                                                                  aCGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGAc                                                         >  1:1005504/1‑69 (MQ=255)
                                                                                  aCGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGAc                                                         <  2:1005504/69‑1 (MQ=255)
                                                                                       cTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTctgc                                       <  1:9056/82‑1 (MQ=255)
                                                                                       cTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTctgc                                       >  2:9056/1‑82 (MQ=255)
                                                                                         ccAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGccacca                                                              <  1:1010628/57‑1 (MQ=255)
                                                                                         ccAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGccacca                                                              >  2:1010628/1‑57 (MQ=255)
                                                                                                    tCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGc                        >  1:1092320/1‑84 (MQ=255)
                                                                                                    tCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGc                        <  2:1092320/84‑1 (MQ=255)
                                                                                                    tCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGcgcg                  >  1:700816/1‑90 (MQ=255)
                                                                                                    tCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGcgcg                  <  2:700816/90‑1 (MQ=255)
                                                                                                                     |                                                                                        
GATGCGCTCGATCGAGAAGACCTCGCGCGCGACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCACGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGCGCGGCGTCCTCATACGCCT  >  AM260479/2579922‑2580127

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: