Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	145727	145748	22	2 [0]	[0] 2	PHG148/PHG149	conserved hypothetical protein/hypothetical protein

GGTTGGTTGCTGGTTGGTTGGGAATGCCGGCGAGTGGTCCCGGAAGGCATTTTTGAGGGACCGTGGAAGGTGAGGGGAAGCGAGATGGAT  >  AY305378/145749‑145838 |                                                                                          ggttggttGCTGGTTGGTTGGGAATGCCGGCGAGTGGTCCCGGAAGGCATTTTTGAGGGACCGTGGAAGGTGAGGGGAAGCGAGATGGAt  >  1:386565/1‑90 (MQ=255) ggttggttGCTGGTTGGTTGGGAATGCCGGCGAGTGGTCCCGGAAGGCATTTTTGAGGGACCGTGGAAGGTGAGGGGAAGCGAGATGGAt  <  2:386565/90‑1 (MQ=255) |                                                                                          GGTTGGTTGCTGGTTGGTTGGGAATGCCGGCGAGTGGTCCCGGAAGGCATTTTTGAGGGACCGTGGAAGGTGAGGGGAAGCGAGATGGAT  >  AY305378/145749‑145838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑