Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | AM260479 | 1,112,158 | Δ1 bp | coding (2295/2469 nt) | xdhB1 ← | xanthine dehydrogenase, subunit B |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | AM260479 | 1,112,156 | 0 | C | . | 100.0% | 49.2 / NA | 12 | coding (2297/2469 nt) | xdhB1 | xanthine dehydrogenase, subunit B |
Reads supporting (aligned to +/- strand): ref base C (0/0); new base . (4/8); total (4/8) |
CGCGGCCAAGGGGGGAAAGTCCGGGGGCGCCCGCAGGCGCGCGCTTCCTGCGATCGTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCGCCCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCGGTAGTCGCCAACGGCAGCCACGGCGTCGCGGATCGCGAAGAACACCGAGAACGGCAGCAGCAGCGGCGGCTCGCCCACGGCCTT > AM260479/1112037‑1112280 | cgcgGCCAAGGGGGGAAAGTCCGGGGGCGCCCGCAGGCGCGCGCTTCCTGCGATCGTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCg > 1:298617/1‑134 (MQ=255) aGGGGGGAAAGTCCGGGGGCGCCCGCAGGCGCGCGCTTCCTGCGATCGTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTc < 2:298617/134‑1 (MQ=255) tCCGGGGGCGCCCGCAGGCGCGCGCTTCCTGCGATCGTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGtt < 2:557098/134‑1 (MQ=255) gggggCGCCCGCAGGCGCGCGCTTCCTGCGATCGTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGAt < 2:147700/134‑1 (MQ=255) gcgcCCGCAGGCGCGCGCTTCCTGCGATCGTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCgg > 2:311357/1‑134 (MQ=255) gTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCGGTAGTCGCCAACGGCAGCCACGGCGTcgcg < 1:247531/134‑1 (MQ=255) ttCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCGGTAGTCGCCAACGGCAGCCACGGCGTcgcg > 2:247531/1‑133 (MQ=255) cGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCGGTAGTCGCCAACGGCAGCCACGGCGTCGCGGAt < 2:945673/133‑1 (MQ=255) gCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAg < 1:92763/84‑1 (MQ=255) gCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAg > 2:92763/1‑84 (MQ=255) cgcACGGCGTCGACGGCGTCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCGGTAGTCGCCAACGGCAGCCACGGCGTCGCGGATCGCGAAGAACACCGAGAACGGCAGCAGCAgcgg < 1:311357/134‑1 (MQ=255) tCCAGGATCG‑CCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCGGTAGTCGCCAACGGCAGCCACGGCGTCGCGGATCGCGAAGAACACCGAGAACGGCAGCAGCAGCGGCGGCTCGCCCACGGCCtt < 1:321806/134‑1 (MQ=255) | CGCGGCCAAGGGGGGAAAGTCCGGGGGCGCCCGCAGGCGCGCGCTTCCTGCGATCGTTCCGCCAGCTCAGGCTGGCTGCGCCGCGGCTTCGCGCACGGCGTCGACGGCGTCCAGGATCGCCCTCGCTGGTGGCCGGGGCCTTCAGCGGCGGGTTGATGCGGTAGTCGCCAACGGCAGCCACGGCGTCGCGGATCGCGAAGAACACCGAGAACGGCAGCAGCAGCGGCGGCTCGCCCACGGCCTT > AM260479/1112037‑1112280 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |