| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | AM260480 | 69,908 | +G | intergenic (+89/‑184) | h16_B0060 → / → h16_B0061 | conserved hypothetical membrane protein/ABC‑type transporter, periplasmic component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | AM260480 | 69,908 | 1 | . | G | 100.0% | 54.0 / NA | 15 | intergenic (+89/‑184) | h16_B0060/h16_B0061 | conserved hypothetical membrane protein/ABC‑type transporter, periplasmic component |
| Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (9/6); total (9/6) | |||||||||||
TGCCGGCTTTCCCCTGAGCCGTCGGCGTATCGTCGCTTATTGTCGTTCAACGCGGTCGCATGTCTTTCCGCGCGCCCTTGCGGCGCGCCCTGACGCGCATCCTTTA‑CGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATGCGGTAACTTGCGTAACGGCGC > AM260480/69803‑70024 | tgCCGGCTTTCCCCTGAGCCGTCGGCGTATCGTCGCTTATTGTCGTTCAACGCGGTCGCATGTCTTTCCGCGCGCCCTTGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGcc > 2:444583/1‑134 (MQ=255) ggCTTTCCCCTGAGCCGTCGGCGTATCGTCGCTTATTGTCGTTCAACGCGGTCGCATGTCTTTCCGCGCGCCCTTGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTcg > 2:226121/1‑134 (MQ=255) aaCGCGGTCGCATGTCTTTCCGCGCGCCCTTGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCgg < 1:226121/133‑1 (MQ=255) aaCGCGGTCGCATGTCTTTCCGCGCGCCCTTGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGt > 2:247091/1‑134 (MQ=255) aTGTCTTTCCGCGCGCCCTTGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCAt > 1:2068/1‑133 (MQ=255) cccTTGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATGCGGTaa < 1:106317/134‑1 (MQ=255) tGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATg < 1:135282/124‑1 (MQ=255) tGCGGCGCGCCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATg > 2:135282/1‑124 (MQ=255) gcCCTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATGCGGTAACTTGCGTAACgg < 1:444583/134‑1 (MQ=255) cTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGtgtg < 1:40132/62‑1 (MQ=255) cTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGtgtg > 2:40132/1‑62 (MQ=255) cTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAac > 1:134925/1‑75 (MQ=255) cTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAac < 2:134925/75‑1 (MQ=255) cTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATGCGGTAACTTGCGTAACGgcgc > 1:612573/1‑134 (MQ=255) cTGACGCGCATCCTTTAGCGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATGCGGTAACTTGCGTAACGgcgc > 2:754606/1‑134 (MQ=255) | TGCCGGCTTTCCCCTGAGCCGTCGGCGTATCGTCGCTTATTGTCGTTCAACGCGGTCGCATGTCTTTCCGCGCGCCCTTGCGGCGCGCCCTGACGCGCATCCTTTA‑CGCGCCCCGGCTCGCACCGGAACCGCCTTCGCGGTTCCGGTGTGATGCCGCTGCAACACTCCGATCTTTCCCGGTTTGCCCCCATGAGACGCATGCGGTAACTTGCGTAACGGCGC > AM260480/69803‑70024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |