New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 2024415	12 (0.550)	4 (0.200)	4/188	1.6	24.9%	coding (1400/1479 nt)	h16_B1783	outer membrane protein
	?	AM260480	= 2024449	13 (0.640)					coding (1434/1479 nt)	h16_B1783	outer membrane protein

GCAGGGCAAGGAGCTGACCGTGGAAGTGGCTGCCCACGCGCGCTCGCGCGGCGCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTGGGGGGTGGCTGGTAACGTAGCGGGCGGCGGCTCAACCCACCCTGAGCCGCGCCTCC  >  AM260480/2024284‑2024535                                                                                                                                    |                                                                                                                         gCAGGGCAAGGAGCTGACCGTGGAAGTGGCTGCCCACGCGCGCTCGCGCGGCGCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCcgcgcgc                                                                                                                         >  1:810698/1‑133 (MQ=255)                 aCCGTGGAAGTGGCTGCCCACGCGCGCTCGCGCGGCGCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACgt                                                                                                          <  2:810698/132‑1 (MQ=255)                               tGCCCACGCGCGCTCGCGCGGCGCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCa                                                                                                             >  2:515437/1‑115 (MQ=255)                               tGCCCACGCGCGCTCGCGCGGCGCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCa                                                                                                             <  1:515437/115‑1 (MQ=255)                                               cgcgGCGCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCcgcgcggccagcag                                                                          <  2:40024‑M2/134‑15 (MQ=255)                                                gcggcgCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCcgcgcggccagcagc                                                                         >  1:40024‑M2/1‑119 (MQ=255)                                                                                               gAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTGGGGGGTGGCTGGTAACGTAGCGGGCGGCGGCt                          <  1:107974/134‑1 (MQ=255)                                                                                                aaGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTgggggg                                                     <  1:321032/106‑1 (MQ=255)                                                                                                aaGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTgggggg                                                     >  2:321032/1‑106 (MQ=255)                                                                                                aaGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTGGGGGGTGGCTGGTAACGTAGCGGGCGGCGGCt                          >  2:107974/1‑133 (MQ=255)                                                                                                  gTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGggcattgtcggcgcccacacgtgcctgctggt                                                                                          >  2:344613‑M1/1‑35 (MQ=255)                                                                                                  gTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGggcattgtcggcgcccacacgtgcctgctggt                                                                                          <  1:344613‑M1/67‑33 (MQ=255)                                                                                                            aaGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTGGGGGGTGGCTGGTAACGTAgcgggcgg                               >  2:327473/1‑116 (MQ=255)                                                                                                            aaGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTGGGGGGTGGCTGGTAACGTAgcgggcgg                               <  1:327473/116‑1 (MQ=255)                                                                                                                      gctgctgGCCGCGCGggcattgtcggcgcccacacgtgcctgctggtcgcgcgcggccagcagcaggcggtcttcctccagcacttcgaacaggctgaccgcgccgcccttgtaggcgtcctcggcggcgccgc   >  1:40024‑M1/1‑15 (MQ=255)                                                                                                                       ctgctgGCCGCGCGggcattgtcggcgcccacacgtgcctgctggtcgcgcgcggccagcagcaggcggtcttcctccagcacttcgaacaggctgaccgcgccgcccttgtaggcgtcctcggcggcgccgcg  <  2:40024‑M1/134‑121 (MQ=255)                                                                                                                                  gcgcgACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTg                                                          >  1:671775/1‑67 (MQ=255)                                                                                                                                  gcgcgACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTg                                                          <  2:671775/67‑1 (MQ=255)                                                                                                                                    |                                                                                                                         GCAGGGCAAGGAGCTGACCGTGGAAGTGGCTGCCCACGCGCGCTCGCGCGGCGCCGCCGAGGACGCCTACAAGGGCGGCGCGGTCAGCCTGTTCGAAGTGCTGGAGGAAGACCGCCTGCTGCTGGCCGCGCGCGACCAGCAGGCACGTGTGGGCGCCGACAATGCCCGCGCGGCGGTGGCAACGTTCCGTGCGCTGGGGGGTGGCTGGTAACGTAGCGGGCGGCGGCTCAACCCACCCTGAGCCGCGCCTCC  >  AM260480/2024284‑2024535

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.