Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260480	633609	633623	15	2 [0]	[0] 2	fliR/fliQ	flagellar biosynthesis protein/flagellar biosynthesis protein

TCAGGGCCAGGATGCGGAAGAAAGGCCACAGGAACGCCGCGAGCCAGCTGTAGAGCTGGGCTGAGGTGAATTCGACCACGGCGGGGA  >  AM260480/633522‑633608                                                                                       | tCAGGGCCAGGATGCGGAAGAAAGGCCACAGGAACGCCGCGAGCCAGCTGTAGAGCTGGGCTGAGGTGAATTCGACCACGGCGGGGa  >  1:368038/1‑87 (MQ=255) tCAGGGCCAGGATGCGGAAGAAAGGCCACAGGAACGCCGCGAGCCAGCTGTAGAGCTGGGCTGAGGTGAATTCGACCACGGCGGGGa  <  2:368038/87‑1 (MQ=255)                                                                                       | TCAGGGCCAGGATGCGGAAGAAAGGCCACAGGAACGCCGCGAGCCAGCTGTAGAGCTGGGCTGAGGTGAATTCGACCACGGCGGGGA  >  AM260480/633522‑633608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑