Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260480	1208409	1208437	29	2 [0]	[1] 3	h16_B1068	conserved hypothetical protein

ATGTCGTCGGTGACTTCAAGGATGTGGTCCTCCAGG  >  AM260480/1208373‑1208408                                    | aTGTCGTCGGTGACTTCAAGGATGTGGTCCTCCAgg  >  1:403118/1‑36 (MQ=255) aTGTCGTCGGTGACTTCAAGGATGTGGTCCTCCAgg  <  2:403118/36‑1 (MQ=255)                                    | ATGTCGTCGGTGACTTCAAGGATGTGGTCCTCCAGG  >  AM260480/1208373‑1208408

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑