Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	789447	789478	32	2 [0]	[0] 2	h16_A0729	transcriptional regulator, LysR‑family

TTGGCCATGGCCGTCAAATTCTACTCACAATTGCCGCGG  >  AM260479/789479‑789517 |                                       ttGGCCATGGCCGTCAAATTCTACTCACAATTGCCGCgg  >  1:597697/1‑39 (MQ=255) ttGGCCATGGCCGTCAAATTCTACTCACAATTGCCGCgg  <  2:597697/39‑1 (MQ=255) |                                       TTGGCCATGGCCGTCAAATTCTACTCACAATTGCCGCGG  >  AM260479/789479‑789517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑