Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ AM260479 1365460 1365464 5 2 [0] [0] 2 h16_A1255 two domain protein: Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunit

CAGCTCGTCCTTCAACTGCTGCTCGATCACGGGACGCTTTTCCTCGACCACCA  >  AM260479/1365465‑1365517
|                                                    
cAGCTCGTCCTTCAACTGCTGCTCGATCACGGGACGCTTTTCCTCGAccacca  >  1:827546/1‑53 (MQ=255)
cAGCTCGTCCTTCAACTGCTGCTCGATCACGGGACGCTTTTCCTCGAccacca  <  2:827546/53‑1 (MQ=255)
|                                                    
CAGCTCGTCCTTCAACTGCTGCTCGATCACGGGACGCTTTTCCTCGACCACCA  >  AM260479/1365465‑1365517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: