Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1380639	1380643	5	2 [0]	[0] 3	h16_A1272	conserved hypothetical protein

AGGTACAGGCGGGCGGGCGCTGGCAGCATGACGCCAGTCACCGCCAGGGCGTGGCCTACCGCGACAACGCCACCCGCGAGAAATTCTCGCGCGATGTGCCAGGCGGGGACCGGCGCAATGAGTTCCGCGGTCGC  >  AM260479/1380644‑1380777 |                                                                                                                                      aGGTACAGGCGGGCGGGCGCTGGCAGCATGACGCCAGTCACCGCCAGGGCGTGGc                                                                                 <  1:200402/55‑1 (MQ=255) aGGTACAGGCGGGCGGGCGCTGGCAGCATGACGCCAGTCACCGCCAGGGCGTGGc                                                                                 >  2:200402/1‑55 (MQ=255) aGGTACAGGCGGGCGGGCGCTGGCAGCATGACGCCAGTCACCGCCAGGGCGTGGCCTACCGCGACAACGCCACCCGCGAGAAATTCTCGCGCGATGTGCCAGGCGGGGACCGGCGCAATGAGTTCCGCGGTcgc  >  1:1042303/1‑134 (MQ=255) |                                                                                                                                      AGGTACAGGCGGGCGGGCGCTGGCAGCATGACGCCAGTCACCGCCAGGGCGTGGCCTACCGCGACAACGCCACCCGCGAGAAATTCTCGCGCGATGTGCCAGGCGGGGACCGGCGCAATGAGTTCCGCGGTCGC  >  AM260479/1380644‑1380777

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑