Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1381080	1381091	12	3 [0]	[0] 2	h16_A1272	conserved hypothetical protein

GGGCGTGGGCGGCGGCGCGGCGTCGCAGCGCGACTTTGATCGCGGACGCTCCAGCATGCAGTCGGCCGGAGGCCGCGCAGG  >  AM260479/1381092‑1381172 |                                                                                 gggCGTGGGCGGCGGCGCGGCGTCGCAGCGCGACTTTGATCGCGGACGCTCCAGCATGCAGTCGGCCGGAGGCCGCGCAgg  >  1:949680/1‑81 (MQ=255) gggCGTGGGCGGCGGCGCGGCGTCGCAGCGCGACTTTGATCGCGGACGCTCCAGCATGCAGTCGGCCGGAGGCCGCGCAgg  <  2:949680/81‑1 (MQ=255) |                                                                                 GGGCGTGGGCGGCGGCGCGGCGTCGCAGCGCGACTTTGATCGCGGACGCTCCAGCATGCAGTCGGCCGGAGGCCGCGCAGG  >  AM260479/1381092‑1381172

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑