Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1993399	1993411	13	2 [0]	[0] 2	h16_A1831	Hypothetical protein

GCGGTGCCAAGCGAAACACGGGACGAACAGCAAGACGACAAGCAGGGCGCGCCAGCGGCC  >  AM260479/1993412‑1993471 |                                                            gCGGTGCCAAGCGAAACACGGGACGAACAGCAAGACGACAAGCAGGGCGCGCCAGCGgcc  >  1:1050177/1‑60 (MQ=255) gCGGTGCCAAGCGAAACACGGGACGAACAGCAAGACGACAAGCAGGGCGCGCCAGCGgcc  <  2:1050177/60‑1 (MQ=255) |                                                            GCGGTGCCAAGCGAAACACGGGACGAACAGCAAGACGACAAGCAGGGCGCGCCAGCGGCC  >  AM260479/1993412‑1993471

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑