Predicted mutation
evidence seq id position mutation annotation gene description
RA AM260479 628,642 Δ1 bp coding (756/1206 nt) h16_A0595 ← Uncharacterized Fe‑S protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AM260479628,6410A.100.0% 82.0 / NA 19coding (757/1206 nt)h16_A0595Uncharacterized Fe‑S protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (9/10);  total (9/10)

CTTGTTCCACGGGCAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAAGCGGCGCGCGTCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTCCAGGCAGCGGTGGCAGTTGCCGCAGTGGCCGGACTCGGGGGCGTCGGCCGGCAGCGGGATGTCGACCA  >  AM260479/628525‑628763
                                                                                                                    |                                                                                                                           
cTTGTTCCACGGGCAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGgcgc                                                                                                                     >  2:610181/1‑124 (MQ=255)
cTTGTTCCACGGGCAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGgcgc                                                                                                                     <  1:610181/124‑1 (MQ=255)
        aCGGGCAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTc                                                                                                               >  1:215358/1‑121 (MQ=255)
        aCGGGCAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTc                                                                                                               <  2:215358/121‑1 (MQ=255)
             cAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTccagcc                                                                                                          <  2:915542/121‑6 (MQ=255)
             cAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTccagcc                                                                                                          >  1:915542/1‑116 (MQ=255)
                        gCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGgcgcgc                                                                                    <  1:423628/133‑1 (MQ=255)
                           gtcgtcGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTgg                                                                                <  2:412620/134‑1 (MQ=255)
                                 gCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTgggg                                                                              >  1:875588/1‑130 (MQ=255)
                                      cGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTcc                                                                     <  1:527115/134‑1 (MQ=255)
                                                    cccATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGa                                                                                            <  1:903723/97‑1 (MQ=255)
                                                    cccATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGa                                                                                            >  2:903723/1‑97 (MQ=255)
                                                          ggCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTCCAGGCAGCGGTGGCAGTTGc                                                  <  2:875588/133‑1 (MQ=255)
                                                             gcgcgGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTCCAGGCAGCGGTGGCAGTTGCCg                                                >  1:211581/1‑132 (MQ=255)
                                                                             gAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCagc                                                                                                                           <  2:604142/42‑3 (MQ=255)
                                                                             gAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCagc                                                                                                                           >  1:604142/1‑40 (MQ=255)
                                                                                      ccTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGgcgc                                                                                                                     >  2:250916/1‑38 (MQ=255)
                                                                                      ccTTGTGCTCGATGGTCAGGTAGGAGATGCAGCGgcgc                                                                                                                     <  1:250916/38‑1 (MQ=255)
                                                                                         tgtgCTCGATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTCCAGGCAGCGGTGGCAGTTGCCGCAGTGGCCGGACTCGGGGGCGTcggccgg                   >  1:816095/1‑133 (MQ=255)
                                                                                                gATGGTCAGGTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTCCAGGCAGCGGTGGCAGTTGCCGCAGTGGCCGGACTCGGGGGCGTCGGCCGGCAGCGGGa           >  1:210681/1‑134 (MQ=255)
                                                                                                         gTAGGAGATGCAGCGGCGCGCGTCCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTCCAGGCAGCGGTGGCAGTTGCCGCAGTGGCCGGACTCGGGGGCGTCGGCCGGCAGCGGGATGTCGACCa  <  2:211581/134‑1 (MQ=255)
                                                                                                                    |                                                                                                                           
CTTGTTCCACGGGCAGGCCAGCTGGCAGTCGTCGCAGCCGTAGACGCGGTTGCCCATGGGCGCGCGGAACTCCACCGGAATCGGGCCCTTGTGCTCGATGGTCAGGTAGGAGATGCAAGCGGCGCGCGTCAGCCGGTACGGCGCCACGATGGCGCGCGTGGGGCAGATGTCCAGGCAGCGGTGGCAGTTGCCGCAGTGGCCGGACTCGGGGGCGTCGGCCGGCAGCGGGATGTCGACCA  >  AM260479/628525‑628763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: