New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	891285 =	15 (0.530)	5 (0.190)	3/194	2.4	25.8%	coding (871/1824 nt)	h16_B0787	outer membrane efflux protein
	?	AM260480	891325 =	15 (0.580)					coding (831/1824 nt)	h16_B0787	outer membrane efflux protein

CGGCCCGTTGCCGAAATCCGTGACCGATGCCGGCGCGGCAACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260480/891328‑891285 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaacggGCCGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTGCGAGGTCTGCACCTGGGTTTGCGCGCGATGCTGGTCCAGCTGCGCCATCGCACCAACCT  >  AM260480/891325‑891455                                                                                                                                                                                 CGGCCCGTTGCCGAAATCCGTGACCGATGCCGGCGCGGCAACGGGCCGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTGCGAGGTCTGCACCTGGGT                                           >  2:138996/1‑134       GTTGCCGAAATCCGTGACCGATGCCGGCGCGGCAACGGGCCGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTGCG                                                           <  1:52155/112‑1       GTTGCCGAAATCCGTGACCGATGCCGGCGCGGCAACGGGCCGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTGCG                                                           <  1:880153/112‑1       GTTGCCGAAATCCGTGACCGATGCCGGCGCGGCAACGGGCCGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTGCG                                                           >  2:52155/1‑112       GTTGCCGAAATCCGTGACCGATGCCGGCGCGGCAACGGGCCGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTGCG                                                           >  2:880153/1‑112                                          CGGGACGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTACGAGGTCTGCACCTGGGTTTGCGCGCGATGCTGGTCCAGCTGCGCCATCGCACCAACCT  >  1:381861/1‑134                                                                                                                                                                                 CGGCCCGTTGCCGAAATCCGTGACCGATGCCGGCGCGGCAACGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AM260480/891328‑891285 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaacggGCCGCCGATCAGCAAGGACAGCGCGTTCTCATCCTGCGCCACCTGCCGCGTGTATTGCTCAACGCCGACCTGCGAGGTCTGCACCTGGGTTTGCGCGCGATGCTGGTCCAGCTGCGCCATCGCACCAACCT  >  AM260480/891325‑891455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.