| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | AY305378 | 84,810 | ISAE1 (+) +8 bp | [hoxW] | [hoxW] | |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AY305378 | 84810 = | 0 (0.000) | 24 (0.870) | 21/212 | 0.2 | 100% | coding (496/498 nt) | hoxW | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease |
| ? | AY305378 | = 94337 | NA (NA) | noncoding (1313/1313 nt) | ISAE1 | repeat region | |||||
| * | ? | AY305378 | = 84817 | 0 (0.000) | 31 (1.130) | 24/210 | 0.1 | 100% | intergenic (+5/‑18) | hoxW/hoxI | [NiFe] hydrogenase (HoxH‑specific) C‑terminal protease/HoxI |
| ? | AY305378 | 93025 = | NA (NA) | noncoding (1/1313 nt) | ISAE1 | repeat region | |||||
CTATGTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AY305378/84689‑84817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGGGCCTTGCGCTTGGCGGC > AY305378/93025‑93158 CTATGTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTC > 2:687080/1‑134CTATGTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTC > 1:419551/1‑134 TGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTT < 2:644919/133‑1 CGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAAT < 2:515618/134‑1 GGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGT < 1:496144/134‑1 CGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGC < 1:1099853/134‑1 TGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCA > 1:413199/1‑134 CGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGT < 2:197687/132‑1 ATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATC < 2:419551/134‑1 GACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAG > 1:775183/1‑132 CGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAA < 2:583020/90‑1 CGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAA > 1:583020/1‑90 GCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTT < 1:623658/134‑1 CACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTC > 2:909539/1‑134 GATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCCCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGAT > 1:313030/1‑133 ATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCA > 1:164668/1‑134 ATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCA > 2:327250/1‑134 TGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCAC > 1:59843/1‑134 TGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGT > 1:170197/1‑75 TGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGT < 2:170197/75‑1 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTG > 1:1010366/1‑134 ATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTG < 2:164668/134‑1 TCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGC < 1:550029/134‑1 TCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGC > 1:927984/1‑134 TCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGT < 2:202210/70‑1 TCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGT > 1:202210/1‑70 CTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTT < 2:211080/133‑1 GCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGA > 2:798647/1‑100 GCGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGA < 1:798647/100‑1 CGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTT > 2:120097/1‑126 CGGGCCGAGCGTCAAACCTCGTGAAATCAGGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTT < 1:120097/126‑1 GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGGGCCTTGCGCTTGGCGGC > 2:552598/1‑134 CTATGTGCTGGCGATCCGGGGCTACGAGTGGGAGCTCCGCATGGGGCTGACACCGCAGGCACGGCATAACCTGGACGATGCGATCGCCCATTTCTCGATGCGGGCCGAGCGTCAAACCTCGTGAAATCAg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AY305378/84689‑84817‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCTCTTTTGAAAAATGAGTGGGTTATGCGGCATGCGGGTTGATCGCGGAGAAGTCGAGCTTTCCGGCGATCAGGAAGATCACGGTGCGCATGGTTTTGAAGCTCACATAACCGCGGGCCTTGCGCTTGGCGGC > AY305378/93025‑93158 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |