New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AM260479 2455228 =15 (0.550)3 (0.120) 3/196 2.3 20.1% coding (48/909 nt) h16_A2260 predicted hydrolase or acyltransferase
?AM260479 2455267 = 10 (0.400)coding (87/909 nt) h16_A2260 predicted hydrolase or acyltransferase

CCACCGTGGATGTCAATAGAGAGGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGCCAGCGGGCGC  >  AM260479/2455095‑2455346
                                                                                                                                     |                                                                                                                      
ccACCGTGGATGTCAATAGAGAGGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTc                                                                                                                        >  2:442396/1‑134 (MQ=255)
                  gagagGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCAcgc                                                                                                      <  1:972288/134‑1 (MQ=255)
                  gagagGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCAcgc                                                                                                      >  2:972288/1‑134 (MQ=255)
                          cccTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCtt                                                                                              >  2:1053875/1‑134 (MQ=255)
                            cTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGc                                                                                            >  2:495371/1‑134 (MQ=255)
                                       gCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGgcgc                                                                                 <  1:881759/134‑1 (MQ=255)
                                        cATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGcgcg                                                                                <  1:1053875/134‑1 (MQ=255)
                                          tCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGgcgaacg                                                                              <  1:324515/134‑5 (MQ=255)
                                          tCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGgcgaacg                                                                              <  1:479617/134‑5 (MQ=255)
                                                                                  gtcgtTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGt                                      >  2:952448/1‑134 (MQ=255)
                                                                                   tcgtTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAg                                                                     >  1:474375/1‑102 (MQ=255)
                                                                                   tcgtTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAg                                                                     <  2:474375/102‑1 (MQ=255)
                                                                                        ggACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCa                                >  1:749393/1‑134 (MQ=255)
                                                                                                ccGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAg                        >  2:300646/1‑134 (MQ=255)
                                                                                                 tgcagcaacagcagcggccgtccctggccggtttcgCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAgg                       <  1:1102353‑M1/98‑1 (MQ=255)
                                                                                                     gcaacagcagcggccgtccctggccggtttcgCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCtt                   <  2:759585‑M1/102‑1 (MQ=255)
                                                                                                               ccGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGcc           <  1:300646/132‑1 (MQ=255)
                                                                                                                       cctggccggtttcgCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGCCAGCGGgcgc  >  1:759585‑M1/15‑133 (MQ=255)
                                                                                                                                     |                                                                                                                      
CCACCGTGGATGTCAATAGAGAGGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGCCAGCGGGCGC  >  AM260479/2455095‑2455346

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.