New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AM260479 | 2455228 = | 15 (0.550) | 3 (0.120) | 3/196 | 2.3 | 20.1% | coding (48/909 nt) | h16_A2260 | predicted hydrolase or acyltransferase |
? | AM260479 | 2455267 = | 10 (0.400) | coding (87/909 nt) | h16_A2260 | predicted hydrolase or acyltransferase |
CCACCGTGGATGTCAATAGAGAGGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGCCAGCGGGCGC > AM260479/2455095‑2455346 | ccACCGTGGATGTCAATAGAGAGGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTc > 2:442396/1‑134 (MQ=255) gagagGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCAcgc < 1:972288/134‑1 (MQ=255) gagagGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCAcgc > 2:972288/1‑134 (MQ=255) cccTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCtt > 2:1053875/1‑134 (MQ=255) cTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGc > 2:495371/1‑134 (MQ=255) gCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGgcgc < 1:881759/134‑1 (MQ=255) cATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGcgcg < 1:1053875/134‑1 (MQ=255) tCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGgcgaacg < 1:324515/134‑5 (MQ=255) tCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGgcgaacg < 1:479617/134‑5 (MQ=255) gtcgtTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGt > 2:952448/1‑134 (MQ=255) tcgtTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAg > 1:474375/1‑102 (MQ=255) tcgtTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAg < 2:474375/102‑1 (MQ=255) ggACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCa > 1:749393/1‑134 (MQ=255) ccGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAg > 2:300646/1‑134 (MQ=255) tgcagcaacagcagcggccgtccctggccggtttcgCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAgg < 1:1102353‑M1/98‑1 (MQ=255) gcaacagcagcggccgtccctggccggtttcgCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCtt < 2:759585‑M1/102‑1 (MQ=255) ccGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGcc < 1:300646/132‑1 (MQ=255) cctggccggtttcgCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGCCAGCGGgcgc > 1:759585‑M1/15‑133 (MQ=255) | CCACCGTGGATGTCAATAGAGAGGCACCCTCACCCGGTGGCATCCAGGCCGCTGCCCTTTACCCTCCTGCCAGGAGAGAACCGTCGTTGGACGCTCCCGATTCGGCACCTGCCGGCCCCGCTTCGCCGCCGTTCGCCAGCCACCCGGCACGCGGCGCCTTGCCAGGCTGGCGCGAAACCGGCCAGGGACGGCCGCTGCTGTTGCTGCACGGCTGGTCCGTCACCGGCGAGGCCTTCGACGGCCAGCGGGCGC > AM260479/2455095‑2455346 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |