New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	= 1643113	8 (0.280)	3 (0.120)	3/190	2.4	22.9%	coding (1782/2094 nt)	h16_B1463	fusaric acid resistance efflux transporter,permease protein
	?	AM260480	= 1643176	13 (0.510)					coding (1845/2094 nt)	h16_B1463	fusaric acid resistance efflux transporter,permease protein

CCCGCGCGCGCCGGTCAACAGCGCGCGGCTGCGCGGCCGCATGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTGGCGTGCCTGCGCCGCACCGCCGTGCCGTGGAGCGCGTGCTGGCCGGCGTGGCACGCCACTAC  >  AM260480/1643005‑1643239                                                                                                             |                                                                                                                               cccGCGCGCGCCGGTCAACAGCGCGCGGCTGCGCGGCCGCATGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCagcgggggcgcgccgcaccgccgtg                                                                                                       >  1:3335‑M1/1‑109 (MQ=255)                  aCAGCGCGCGGCTGCGCGGCCGCATGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCcgcgctc                                                                                      >  1:273195/1‑134 (MQ=255)                               gcgcGGCCGCATGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGgcgcg                                                                         >  2:877228/1‑134 (MQ=255)                                cgcgGCCGCATGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGgcgcgc                                                                        <  1:651739/134‑1 (MQ=255)                                         aTGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCagcgggggcgcgccgcagcgcgagcgcggcggattcgaccaggaagtcggcaacggcgctg                                                                   >  1:369197‑M1/1‑69 (MQ=255)                                         aTGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCagcgggggcgcgccgcagcgcgagcgcggcggattcgaccaggaagtcggcaacggcgctg                                                                   <  2:369197‑M1/130‑62 (MQ=255)                                               gACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTggcgtgcc                                                         >  2:931311‑M2/1‑126 (MQ=255)                                                 ccGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTggcgtg                                                           <  1:147976‑M2/130‑7 (MQ=255)                                                 ccGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTggcgtg                                                           >  2:147976‑M2/1‑124 (MQ=255)                                                         tgcGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTGGCGTGCCTGCGCCGCAc                                               >  1:292807/1‑134 (MQ=255)                                                                   gccgccATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTGGCGTGCCTGCGCCGCACCgccgtgccg                                     <  1:877228/134‑1 (MQ=255)                                                                                      aacaaTGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTGGCGTGCCTGCGCCGCACCGCCGTGCCGTGGAGCGCGTGCTGGCCgg                  >  2:13318/1‑134 (MQ=255)                                                                                           tGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTGGCGTGCCTGCGCCGCACCGCCGTGCCGTGGAGCGCGTGCTGGCCGGCGTgg             >  1:626562/1‑134 (MQ=255)                                                                                             ccAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTGGCGTGCCTGCGCCGCACCGCCGTGCCGTGGAGCGCGTGCTGGCCGGCGTGGCa           <  2:626562/134‑1 (MQ=255)                                                                                                      ggcaCGCCagcgggggcgcgccgcagcgcgagcgcggcggattcgaccaggaagtcggcaacggcgctgccggcgtgcctgccgctggcattgttgcggcgggtcaatggcggccactggcgcagcagccggtc  >  2:931311‑M1/1‑8 (MQ=255)                                                                                                        caCGCCagcgggggcgcgccgcagcgcgagcgcggcggattcgaccaggaagtcggcaacggcgctgccggcgtgcctgccgctggcattgttgcggcgggtcaatggcggccactggcgcagcagccgg    >  2:147976‑M1/1‑6 (MQ=255)                                                                                                        caCGCCagcgggggcgcgccgcagcgcgagcgcggcggattcgaccaggaagtcggcaacggcgctgccggcgtgcctgccgctggcattgttgcggcgggtcaatggcggccactggcgcagcagccgg    <  1:147976‑M1/130‑125 (MQ=255)                                                                                                             |                                                                                                                               CCCGCGCGCGCCGGTCAACAGCGCGCGGCTGCGCGGCCGCATGCTGGACCGGCTGCTGCGCCAGTGGCCGCCATTGACCCGCCGCAACAATGCCAGCGGCAGGCACGCCGGCAGCGCCGTTGCCGACTTCCTGGTCGAATCCGCCGCGCTCGCGCTGCGGCGCGCCCCCGCTGGCGTGCCTGCGCCGCACCGCCGTGCCGTGGAGCGCGTGCTGGCCGGCGTGGCACGCCACTAC  >  AM260480/1643005‑1643239

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.