| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | AM260479 | 1,714,344 | (CGAAGC)17→9 | coding (1338‑1385/3312 nt) | h16_A1582 → | DNA segregation ATPase FtsK/SpoIIIE related protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | AM260479 | 1714287 | 1714334 | 48 | 20 [0] | [0] 20 | h16_A1582 | DNA segregation ATPase FtsK/SpoIIIE related protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 1714335 = | 0 (0.000) | 16 (1.270) | 13/98 | 0.1 | 100% | coding (1329/3312 nt) | h16_A1582 | DNA segregation ATPase FtsK/SpoIIIE related protein |
| ? | AM260479 | = 1714286 | 0 (0.000) | coding (1280/3312 nt) | h16_A1582 | DNA segregation ATPase FtsK/SpoIIIE related protein | |||||
CTGGCCGGCAAGCCGGTAGTGCCGCAAGCGGCTGCGCCGCAACCGCAACAACTGGACGCGGCTGTGCCGGATTCGGCGCCGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCGAGGAGCGGAGATCACGCCGTTGTCA > AM260479/1714156‑1714417 | cTGGCCGGCAAGCCGGTAGTGCCGCAAGCGGCTGCGCCGCAACCGCAACAACTGGACGCGGCTGTGCCGGATTCGGCGCCGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagc < 1:474266‑M2/134‑4 (MQ=255) cgcaacAACTGGACGCGGCTGTGCCTGATTCGGCGCCGGACATTGCCGTCGTCGCAGAACCGCAAGCACTGGCTACCGTCACCCTCCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcc > 2:52448‑M2/1‑88 (MQ=255) ggATTCGGCGCCGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagat < 2:641607‑M2/133‑71 (MQ=255) aTTCGGCGCCGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcac < 2:628581‑M2/134‑74 (MQ=255) ccGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcgga < 1:754800‑M2/120‑68 (MQ=255) ccGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcgga > 2:754800‑M2/1‑53 (MQ=255) ccGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaa > 1:622649‑M2/1‑53 (MQ=255) ccGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaa < 2:622649‑M2/60‑8 (MQ=255) aCATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcatt > 1:1086422‑M2/1‑49 (MQ=255) cGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaggcgaggagcggagatcacgccgttgtcattggggaacccgaag < 2:203422‑M2/134‑99 (MQ=255) gCAAGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcag > 2:1109848‑M2/1‑27 (MQ=255) aGCACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcag > 1:333846‑M2/1‑24 (MQ=255) cACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggag > 2:1086939‑M2/1‑22 (MQ=255) cACTGGCTACCGTCACCCTGCCagccgaagccgaagccgaagccgaaaccgaagccgaagccgaagccgaagccgaagcgaggagcggag < 1:1086939‑M2/90‑69 (MQ=255) ccGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcagccgtgcccgca < 2:935656‑M2/134‑122 (MQ=255) ccGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgtt > 2:970636‑M2/1‑13 (MQ=255) ccGTCACCCTGCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgtt < 1:970636‑M2/92‑80 (MQ=255) gCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcattggggaacccgaagcgctggcagcagccgtgcccgcactggatatca < 2:547853‑M2/134‑132 (MQ=255) gCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcatt < 2:160888‑M2/88‑86 (MQ=255) gCCagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagccgaagcgaggagcggagatcacgccgttgtcatt > 1:160888‑M2/1‑3 (MQ=255) | CTGGCCGGCAAGCCGGTAGTGCCGCAAGCGGCTGCGCCGCAACCGCAACAACTGGACGCGGCTGTGCCGGATTCGGCGCCGGACATTGCCGGCGACGCAGAACCGCAAGCACTGGCTACCGTCACCCTGCCAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCCGAAGCGAGGAGCGGAGATCACGCCGTTGTCA > AM260479/1714156‑1714417 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |