New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	1871750 =	NA (NA)	6 (0.240)	6/198	1.6	NA	coding (264/939 nt)	apbA1	ketopantoate reductase
	?	AM260479	1871767 =	NA (NA)					coding (281/939 nt)	apbA1	ketopantoate reductase

ATCGCCCGGTAAAGATGGTCCTGGCCGGTCAGGTCGGCGCGCAGTTCGACGTGGTACTGCTGGCATGCAAGGCCTACGACCTTGCCGACGCGATCCGGGCCATCAGCCCGGCCGTTGGCCGGGACACTGCG  >  AM260479/1871644‑1871774                                                                                                                            |        aTCGCCCGGTAAAGATGGTCCTGGCCGGTCAGGTCGGCGCGCAGTTCGACGTGGTACTGCTGGCATGCAAGGCCTACGACCTTGCCGACGCGATCCGGGCCATCAGCCCGGCCGTTGGCCGGGACACTGCg  >  1:996756/1‑131 (MQ=31) aTCGCCCGGTAAAGATGGTCCTGGCCGGTCAGGTCGGCGCGCAGTTCGACGTGGTACTGCTGGCATGCAAGGCCTACGACCTTGCCGACGCGATCCGGGCCATCAGCCCGGCCGTTGGCCGGGACACTGCg  <  2:996756/131‑1 (MQ=31)                                                                                                                            |        ATCGCCCGGTAAAGATGGTCCTGGCCGGTCAGGTCGGCGCGCAGTTCGACGTGGTACTGCTGGCATGCAAGGCCTACGACCTTGCCGACGCGATCCGGGCCATCAGCCCGGCCGTTGGCCGGGACACTGCG  >  AM260479/1871644‑1871774

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.