New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AM260480 | = 2106126 | 9 (0.320) | 4 (0.150) | 4/196 | 2.1 | 28.2% | coding (1385/1623 nt) | h16_B1862 | Rhodanese‑related sulfurtransferase |
? | AM260480 | = 2106180 | 12 (0.460) | coding (1331/1623 nt) | h16_B1862 | Rhodanese‑related sulfurtransferase |
AGCCCCGCTGCAATCCACGCCTGGGTGCCGCCTTCCAGCACCAGCACTTCCGCATCCGTCAGGCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCTGGTGGTGAAGTCGAGGACAGCGGTGCTGCCGTCGCC > AM260480/2106060‑2106313 | aGCCCCGCTGCAATCCACGCCTGGGTGCCGCCTTCCAGCACCAGCACTTCCGCATCCGTCAGGCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTg < 2:138782/134‑1 (MQ=255) tCCACGCCTGGGTGCCGCCTTCCAGCACCAGCACTTCCGCATCCGTCAGGCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGc < 2:818313/134‑1 (MQ=255) tCCACGCCTGGGTGCCGCCTTCCAGCACCAGCACTTCCGCATCCGTCAGGCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGc < 2:972731/134‑1 (MQ=255) tCAGGCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCggg > 1:785704/1‑133 (MQ=255) ggCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGc > 1:1103122/1‑86 (MQ=255) ggCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGc < 2:1103122/86‑1 (MQ=255) aGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTagcgcctgacggatgcggaagtgctggtgctggaaggcggcacccaggcgtggattgcagcggggctgccgctggaaagcggggaaacgcgcct > 1:334997‑M2/1‑36 (MQ=255) aGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTagcgcctgacggatgcggaagtgctggtgctggaaggcggcacccaggcgtggattgcagcggggctgccgctggaaagcggggaaacgcgcct < 2:334997‑M2/130‑95 (MQ=255) cgcgcCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCtggt < 1:7001/134‑1 (MQ=255) gCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCTGGTGGTGAAGTCGa < 1:950776/134‑1 (MQ=255) cGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCTGGTGGTGAAGTCGAGGACAGCg > 1:571143/1‑134 (MQ=255) gCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCTGGTGGTGAAGTCGAGGACAGCgg > 1:1030109/1‑134 (MQ=255) cGTagcgcctgacggatgcggaagtgctggtgctggaaggcggcacccaggcgtggattgcagcggggctgccgctggaaagcggggaaacgcgcctggcctcggaa > 1:503597‑M2/1‑3 (MQ=255) cGTagcgcctgacggatgcggaagtgctggtgctggaaggcggcacccaggcgtggattgcagcggggctgccgctggaaagcggggaaacgcgcctggcctcggaa < 2:503597‑M2/107‑105 (MQ=255) cGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCTGGTGGTGAAGTCGAGGACAGCGGTGCTGCCGTCg < 2:825419/134‑1 (MQ=255) tAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCTGGTGGTGAAGTCGAGGACAGCGGTGCTGCCGTCGcc > 1:553485/1‑134 (MQ=255) | AGCCCCGCTGCAATCCACGCCTGGGTGCCGCCTTCCAGCACCAGCACTTCCGCATCCGTCAGGCGCTGCAGGTCGGCCGCGGCAAAGCGCGCCAGCAGGCTCGATCCGCAGGTGAGCACGTAGCGCCTGGGCTGCGGGATGCGCGGCAGCGCGTCCGCAAGCTGCGCGCGAATGACGAAGTAGGCGCCGGGAATATGGCGCTTGACGTAGTTGGCGCTGGTGGTGAAGTCGAGGACAGCGGTGCTGCCGTCGCC > AM260480/2106060‑2106313 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |