New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260480	2434179 =	14 (0.490)	4 (0.150)	4/204	2.2	21.9%	coding (68/1587 nt)	h16_B2150	conserved hypothetical protein
	?	AM260480	2434216 =	15 (0.550)					coding (31/1587 nt)	h16_B2150	conserved hypothetical protein

AGGTCGGTGGCGGCGGTGCTGCCGCCAGCCTCGGCCGGCACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTACGTGGCAAGCGCACATTGGTTGACCCGGAGGCGC  >  AM260480/2434101‑2434320                                                                                                                    |                                                                                                          aGGTCGGTGGCGGCGGTGCTGCCGCCAGCCTCGGCCGGCACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAAtgctg                                                                                         >  1:711162/1‑134 (MQ=255)   gTCGGTGGCGGCGGTGCTGCCGCCAGCCTCGGCCGGCACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTgcg                                                                                       >  1:601450/1‑134 (MQ=255)          gcggcgGTGCTGCCGCCAGCCTCGGCCGGCACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGAtt                                                                                <  1:680309/134‑1 (MQ=255)            ggcggTGCTGCCGCCAGCCTCGGCCGGCACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCa                                                                              >  1:19270/1‑134 (MQ=255)              cggTGCTGCCGCCAGCCTCGGCCGGCACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATg                                                                            <  2:19270/134‑1 (MQ=255)                 atgttgatcgaacagggcgaggaagcaaggcatgaatccggcgcagcattcgagacaatccggccggggcgcgctcgccgcctggcgggccgccgcggcCGGATTGTCTCGAATGCTGCGCCGGATTCATg                                                                            <  1:116721‑M2/32‑1 (MQ=255)                 atgttgatcgaacagggcgaggaagcaaggcatgaatccggcgcagcattcgagacaatccggccggggcgcgctcgccgcctggcgggccgccgcggcCGGATTGTCTCGAATGCTGCGCCGGATTCATg                                                                            >  2:116721‑M2/100‑131 (MQ=255)                                    cggcACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGa                                                     <  2:711162/134‑1 (MQ=255)                                               catgaatccggcgcagcattcgagacaatccgGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCTTCCTCGCCCTGTTCGATCAACAt                                              >  2:116721‑M1/33‑131 (MQ=255)                                               catgaatccggcgcagcattcgagacaatccgGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCTTCCTCGCCCTGTTCGATCAACAt                                              <  1:116721‑M1/99‑1 (MQ=255)                                                      ggcCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTAc                                   >  2:541937/1‑134 (MQ=255)                                                                    ccagtgccagtgCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGt                                                         >  1:471373/1‑98 (MQ=255)                                                                    ccagtgccagtgCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGt                                                         <  2:471373/98‑1 (MQ=255)                                                                     cagtgccagtgcCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTACGTGGCAAGCGCACAt                    <  2:601450/134‑1 (MQ=255)                                                                      agtgccagtgccGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGa                                                     <  1:766114/100‑1 (MQ=255)                                                                      agtgccagtgccGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGa                                                     >  2:766114/1‑100 (MQ=255)                                                                                  GCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTACGTGGCAAGCGCACATTGGTTGACCCg         <  1:3684‑M1/132‑1 (MQ=255)                                                                                       ggcCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTACGTGGCAAGCGCACAt                    >  1:486456/1‑116 (MQ=255)                                                                                       ggcCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTACGTGGCAAGCGCACAt                    <  2:486456/116‑1 (MQ=255)                                                                                       ggcCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTACGTGGCAAGCGCACATTGGTTGACCCGGAGgcgc  <  2:3684/134‑1 (MQ=255)                                                                                                             ccgcggcCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGa                                                     <  1:392328‑M2/54‑1 (MQ=255)                                                                                                             ccgcggcCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGa                                                     >  2:392328‑M2/8‑61 (MQ=255)                                                                                                                    |                                                                                                          AGGTCGGTGGCGGCGGTGCTGCCGCCAGCCTCGGCCGGCACCTGGGCGCAGGCGGCCAGGCACGCTGCCAGTGCCAGTGCCGCGGCGGCCCGCCAGGCGGCGAGCGCGCCCCGGCCGGATTGTCTCGAATGCTGCGCCGGATTCATGCCTTGCT‑CCTCGCCCTGTTCGATCAACATCACTATGTTACGTGGCAAGCGCACATTGGTTGACCCGGAGGCGC  >  AM260480/2434101‑2434320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.