Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	99908	99967	60	5 [3]	[2] 4	kfrA1	putative KfrA protein

CGAACTGGTGGCGGCGCGCAGCGAGGCCCGCGACGCGGCCGTGGCGCAGGCCGAAGTCCGCGCCCGGCTCGAAGCCCAGGCCGCGGCGCTCGCCGATCGGCTCGCCAGCGCCGAGCAGGCGCAGCGCAAAGTGGCGCACGACCTGG  >  AY305378/99791‑99936                                                                                                                     |                              cgAACTGGTGGCGGCGCGCAGCGAGGCCCGCGACGCGGCCGTGGCGCAGGCCGAAGTCCGCGCCCGGCTCGAAGCCCAGGCCGCGGCGCTCGCCGATCGGCTCGCCAGCGCCGAGCAGGCGCAGCGCAAAGTgg              <  2:22953/134‑1 (MQ=255)            cggcgCGCAGCGAGGCCCGCGACGCGGCCGTGGCGCAGGCCGAAGTCCGCGCCCGGCTCGAAGCCCAGGCCGCGGCGCTCGCCGATCGGCTCGCCAGCGCCGAGCAGGCGCAGCGCAAAGTGGCGCACGACCTg   <  1:101697/134‑1 (MQ=255)             ggcgCGCAGCGAGGCCCGCGCCGCGGCCGTGGCGCAGGCCGAAGTCCGCGCCCGGCTCGAAGCCCAGGCCGCGGCGCTCGCCGATCGGCTCGCCAGCGCCGAGCAGGCGAAGCGCAAAGTGGCGCACGACCTgg  <  2:1112111/134‑1 (MQ=255)                                                     gAAGTCCGCGCCCGGCTCGAAGCCCAGGCCGCGGCGCTCGCCGATCGGCTCGCCAGCGCCGAGCa                               <  1:612685/65‑1 (MQ=255)                                                     gAAGTCCGCGCCCGGCTCGAAGCCCAGGCCGCGGCGCTCGCCGATCGGCTCGCCAGCGCCGAGCa                               >  2:612685/1‑65 (MQ=255)                                                                                                                     |                              CGAACTGGTGGCGGCGCGCAGCGAGGCCCGCGACGCGGCCGTGGCGCAGGCCGAAGTCCGCGCCCGGCTCGAAGCCCAGGCCGCGGCGCTCGCCGATCGGCTCGCCAGCGCCGAGCAGGCGCAGCGCAAAGTGGCGCACGACCTGG  >  AY305378/99791‑99936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑