Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	156555	156889	335	4 [2]	[3] 5	[kfrA2]–[PHG157]	[kfrA2],[PHG157]

CTCGCCACCGCCGAGCAGGCGCAGCGCAAAGCGGCGCACGACCTGGACGCGCTGCAGGCGGAGCTGGGCGCGGCGCAGCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGC  >  AY305378/156447‑156562                                                                                                            |         cTCGCCACCGCCGAGCAGGCGCAGCGCAAAGCGGCGCACGACCTGGACGCGCTGCAGGCGGAGCTGGGCGCGGCGCAGCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGgc  <  1:171525/116‑1 (MQ=255) cTCGCCACCGCCGAGCAGGCGCAGCGCAAAGCGGCGCACGACCTGGACGCGCTGCAGGCGGAGCTGGGCGCGGCGCAGCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGgc  >  2:171525/1‑116 (MQ=255)                                                                   ggcgcggcgcAGCGCCGGGCCGAACGGGCCGAGGCCGAAgcg          >  1:140391/1‑42 (MQ=255)                                                                   ggcgcggcgcAGCGCCGGGCCGAACGGGCCGAGGCCGAAgcg          <  2:140391/42‑1 (MQ=255)                                                                                                            |         CTCGCCACCGCCGAGCAGGCGCAGCGCAAAGCGGCGCACGACCTGGACGCGCTGCAGGCGGAGCTGGGCGCGGCGCAGCGCCGGGCCGAACGGGCCGAGGCCGAAGCGGCGCTGGC  >  AY305378/156447‑156562

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑