Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1085608	1085658	51	4 [2]	[2] 6	h16_A0994	conserved hypothetical protein

GGCGCGCAGGGCAGCATCAGCGGCGGCCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGGCGCACCGGCCGGCACCG  >  AM260479/1085636‑1085720                        |                                                              ggCGCGCAGGGCAGCATCAGCGGCGGCCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGGCGCACCGGCCGGCa     >  1:599852/1‑82 (MQ=255) ggCGCGCAGGGCAGCATCAGCGGCGGCCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGGCGCACCGGCCGGCa     <  2:599852/82‑1 (MQ=255)                        cggcCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGgcgc                <  1:1004532/48‑1 (MQ=255)                        cggcCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGgcgc                >  2:1004532/1‑48 (MQ=255)                        cggcCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGGCGCACCGGCCGGCACCg  <  1:93942/62‑1 (MQ=255)                        cggcCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGGCGCACCGGCCGGCACCg  >  2:93942/1‑62 (MQ=255)                        |                                                              GGCGCGCAGGGCAGCATCAGCGGCGGCCGCAGCCGTGCCTTGCTGGCGGTGCGCGCCGCGGTGCTGGGCGCACCGGCCGGCACCG  >  AM260479/1085636‑1085720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑