Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	3623523	3623582	60	3 [1]	[2] 3	h16_A3349	conserved hypothetical protein

CGGAAGCGGGGGCGGCAATGGCGCCGGCAGCGGCGCCCAGCAGGCCGGCAAGCGCCAGCCCGGCAACGGGGAATTTCAAATCGGACTCCTGATGAACGGCTCCGGGTTGGAGCCCGCCCCGGCCGGGTTGTTCCTGCTTGGCGCGGGCGGTGACGGGAAAGTCACCGGCGGCC  >  AM260479/3623544‑3623716                                        |                                                                                                                                      cGGAAGCGGGGGCGGCAATGGCGCCGGCAGCGGCGCCCAGCAGGCCGGCAAGCGCCAGCCCGGCAACGGGGAATTTCAAATCGGACTCCtga                                                                                   >  1:461750/1‑92 (MQ=255) cGGAAGCGGGGGCGGCAATGGCGCCGGCAGCGGCGCCCAGCAGGCCGGCAAGCGCCAGCCCGGCAACGGGGAATTTCAAATCGGACTCCtga                                                                                   <  2:461750/92‑1 (MQ=255)                                        gcagGCCGGCAAGCGCCAGCCCGGCAACGGGGAATTTCAAATCGGACTCCTGATGAACGGCTCCGGGTTGGAGCCCGCCCCGGCCGGGTTGTTCCTGCTTGGCGCGGGCGGTGACGGGAAAGTCACCGGCGGcc  >  2:952940/1‑134 (MQ=255)                                        |                                                                                                                                      CGGAAGCGGGGGCGGCAATGGCGCCGGCAGCGGCGCCCAGCAGGCCGGCAAGCGCCAGCCCGGCAACGGGGAATTTCAAATCGGACTCCTGATGAACGGCTCCGGGTTGGAGCCCGCCCCGGCCGGGTTGTTCCTGCTTGGCGCGGGCGGTGACGGGAAAGTCACCGGCGGCC  >  AM260479/3623544‑3623716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑