Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	85312	85346	35	5 [0]	[3] 5	[hoxI]	[hoxI]

GGGGGGAGGGGACGGGGTTAGTCACTCTCCGCGTCCAGCTGAAATGCAAAAAAGCATATCCCTCGAGCGCCAGCGACGTGCGTCCCGTCGAGTGGTACCTCAGCGCGTGACCGACATGGTAGGAGCCGATCATG  >  AY305378/85318‑85451                              |                                                                                                         ggggggAGGGGACGGGGTTAGTCACTCTCCGCGTCCAGCTGAAATGCAAAAAAGCATATCCCTCGAGCGCCAGCGACGTGCGTCCCGTCGAGTGGTACCTCAGCGCGTGACCGACATGGTAGGAGCCGATcatg  >  2:508458/1‑134 (MQ=255)                         ctctCCGCGTCCAGCTGAAATGCAAAAAAGCATATCCCTCg                                                                       <  1:409961/41‑1 (MQ=255)                         ctctCCGCGTCCAGCTGAAATGCAAAAAAGCATATCCCTCg                                                                       >  2:409961/1‑41 (MQ=255)                              cgcgTCCAGCTGAAATGCAAAAAAGCATATCCCTCGAGCGCCAGCGACGTGCGTCCCGTCGAGTGGTACCTCAGcgcg                             >  1:516954/1‑78 (MQ=255)                              cgcgTCCAGCTGAAATGCAAAAAAGCATATCCCTCGAGCGCCAGCGACGTGCGTCCCGTCGAGTGGTACCTCAGcgcg                             <  2:516954/78‑1 (MQ=255)                              |                                                                                                         GGGGGGAGGGGACGGGGTTAGTCACTCTCCGCGTCCAGCTGAAATGCAAAAAAGCATATCCCTCGAGCGCCAGCGACGTGCGTCCCGTCGAGTGGTACCTCAGCGCGTGACCGACATGGTAGGAGCCGATCATG  >  AY305378/85318‑85451

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑