Predicted mutation
evidence seq id position mutation annotation gene description
RA AM260479 452,997 Δ1 bp intergenic (‑22/+116) h16_A0432 ← / ← coxF Uncharacterized MobA‑related protein/xanthine and CO dehydrogenase, maturation factor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AM260479452,9940T.100.0% 75.8 / NA 18intergenic (‑19/+119)h16_A0432/coxFUncharacterized MobA‑related protein/xanthine and CO dehydrogenase, maturation factor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base . (9/9);  total (9/9)

CCCGGACGAATGACGGCGATCGATTCCGGCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTCGGTGCGGAGCAGGGGAGCGTTGGGGGCGGCAGTCATGGCGGCACT  >  AM260479/452887‑453102
                                                                                                           |                                                                                                            
cccGGACGAATGACGGCGATCGATTCCGGCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGcc                                                                                   <  2:816277/134‑1 (MQ=255)
              ggCGATCGATTCCGGCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGcc                                                                             >  2:405454/1‑126 (MQ=255)
              ggCGATCGATTCCGGCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGcc                                                                             <  1:405454/126‑1 (MQ=255)
                   tcgatTCCGGCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCcagcag                                                                 >  2:1149531/1‑133 (MQ=255)
                          cGGCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCgg                                                         <  1:1149531/134‑1 (MQ=255)
                           ggCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGt                                                        >  2:250702/1‑134 (MQ=255)
                             cAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGaa                                                                                            >  1:858154/1‑96 (MQ=255)
                             cAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGaa                                                                                            <  2:858154/96‑1 (MQ=255)
                               gcgcCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGc                                                    <  2:252143/134‑1 (MQ=255)
                                    gcgGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTc                                               <  2:1121128/134‑1 (MQ=255)
                                                                             gccgGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTCGGTGCGGAGCAGGGGAGCGTTGGGGGCGGCAGTCATggcgg      >  2:622440/1‑134 (MQ=255)
                                                                               cgGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTCGGTGCGGAg                                      >  2:164099/1‑100 (MQ=255)
                                                                               cgGGCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTCGGTGCGGAg                                      <  1:164099/100‑1 (MQ=255)
                                                                                 ggCAGCACCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTCGGTGCGGAGCAGGGGAGCGTTGGGGGCGGCAGTCATGGCGGCACt  >  1:301437/1‑134 (MQ=255)
                                                                                  gcagcaCCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTc                                               >  1:251028/1‑88 (MQ=255)
                                                                                  gcagcaCCTCCAGCAGCTTGTTGCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTc                                               <  2:251028/88‑1 (MQ=255)
                                                                                                      ttgCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTg                                                                           >  2:1119609/1‑40 (MQ=37)
                                                                                                      ttgCGTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTg                                                                           <  1:1119609/40‑1 (MQ=37)
                                                                                                           |                                                                                                            
CCCGGACGAATGACGGCGATCGATTCCGGCAGCGCCGCGGCCAGCGTGCGGGCGCTGCGCCAGGCCACGGAGCGGCCGCCGGGCAGCACCTCCAGCAGCTTGTTGCGTTTTGCCGGCGGCGTCGAAGCGGCGGCCGTAGCCTGCGGCCAGCAGGATGCCGGTGGGCAGGTCGGTGCGGAGCAGGGGAGCGTTGGGGGCGGCAGTCATGGCGGCACT  >  AM260479/452887‑453102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: