| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260479 | 48246 = | 34 (1.240) | 5 (0.200) | 5/198 | 1.8 | 13.6% | coding (707/933 nt) | h16_A0032 | Prokaryotic protein of unknown function,predicted cytosolic protein |
| ? | AM260479 | 48294 = | 32 (1.260) | coding (659/933 nt) | h16_A0032 | Prokaryotic protein of unknown function,predicted cytosolic protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTGGCCCGGTGTTCATCCAATCCGTCTTCGGCATCCTAGGCGGCATCGGCCCCGATCCCGAGGACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/48381‑48246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccggGCGGTGCGGTGCATGTGCATCAGGTCCTCGGGATCGGGGCCGATGCCG > AM260479/48294‑48341 GTGGCCCGGTGTTCATCCAATCCGTCTTCGGCATCCTAGGCGGCATCGGCCCCGATCCCGAGGACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCC > 2:337302/1‑134 CATCCAATCCGTCTTCGGCATCCTAGGCGGCATCGGCCCCGATCCCGAGGACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCGGGCGGTGCGGT < 1:525950/133‑1 ATCCAATCCGTCTTCGGCATCCTAGGCGGCATCGGCCCCGATCCCGAGGACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCGGGCGGTGCGGTG < 1:424845/133‑1 GGCGGCATCGGCCCCGATCCCGAGGACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCGGGCGGTGCGGTGCATGTGCATCAGGTCCTCGGGATCG < 1:337302/134‑1 ACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCG > 1:960335/1‑72 ACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCG < 2:960335/72‑1 GCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCG > 1:372364/1‑65 GCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCG < 2:372364/65‑1 GGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCGGGCGGTGCGGTGCATGTGCA > 1:869968/1‑54 GGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCGGGCGGTGCGGTGCATGTGCA < 2:869968/54‑1 GGCGCCGGGCGGTGCGGTGCATGTGCATCAGGTCCTCGGGATCGGGGCCGATGCCG > 1:447346/1‑56 GGCGCCGGGCGGTGCGGTGCATGTGCATCAGGTCCTCGGGATCGGGGCCGATGCCG < 2:447346/56‑1 GTGGCCCGGTGTTCATCCAATCCGTCTTCGGCATCCTAGGCGGCATCGGCCCCGATCCCGAGGACCTGATGCACATGCACCGCACCGCCCGGCGCCTGTTCGGCGATCAGTTCCGCTGGTCGATCCTGGGCGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AM260479/48381‑48246‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgccggGCGGTGCGGTGCATGTGCATCAGGTCCTCGGGATCGGGGCCGATGCCG > AM260479/48294‑48341 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |