| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 2887778 | 37 (1.120) | 6 (0.190) | 6/208 | 2.0 | 14.0% | coding (1513/1683 nt) | h16_B2557 | 3‑(3‑hydroxy‑phenyl) propionate hydroxylase |
| ? | AM260480 | 2887792 = | 38 (1.190) | coding (1527/1683 nt) | h16_B2557 | 3‑(3‑hydroxy‑phenyl) propionate hydroxylase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACACACGTGGTGGTCACCGGCGGCAACGTGGCCGGCGCCACGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/2887732‑2887778‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGGCCAGGCCCACGCCCGCTACGGCGCACGACCCGGCACGCTCTACCTGATCCGCCCCGATGGCTATGTCCTGGCACGCTGGCGCGAACCGTCATGGGACGCCGTGCGCGCCACCCTTGCCCCCCTGATGC > AM260480/2887792‑2887922 GACACACGTGGTGGTCACCGGCGGCAACGTGGCCAGCGCCGTGGCGCCGGCCAGGC > 1:1023172/1‑56GACACACGTGGTGGTCACCGGCGGCAACGTGGCCAGCGCCGTGGCGCCGGCCAGGC < 2:1023172/56‑1 GTGGTCACCGGCGGCAACGTGGCCAGCGCCGTGGCGCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCCGGCACGCTCTACCTGATCCGCCCCGATGGCTATGTCCTGGCACGC < 1:1108671/116‑1 GTGGTCACCGGCGGCAACGTGGCCAGCGCCGTGGCGCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCCGGCACGCTCTACCTGATCCGCCCCGATGGCTATGTCCTGGCACGC > 2:1108671/1‑116 TGGTCACCGGCGGCAACGTGGCCAGCGCCGTGGCGCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCCGGCACGCTCTACCTGATCCGCCCCGAT < 1:186885/97‑1 TGGTCACCGGCGGCAACGTGGCCAGCGCCGTGGCGCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCCGGCACGCTCTACCTGATCCGCCCCGAT > 2:186885/1‑97 GCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCCGGCACGCTCTACCTGATCCGCCCCGATGGCTATGTCCTGGCACGCTGGCGCGAACCGTCATGGGACGCCGTGCGCGCCACCCTTGCCCCCCTGATGC > 2:901478/1‑133 GCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCC > 1:601889/1‑36 GCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCC > 1:878104/1‑36 GCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCC < 2:601889/36‑1 GCCGGCCAGGCCCACGCCCGCTACGGCGCACGACCC < 2:878104/36‑1 GACACACGTGGTGGTCACCGGCGGCAACGTGGCCGGCGCCACGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/2887732‑2887778‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcCGGCCAGGCCCACGCCCGCTACGGCGCACGACCCGGCACGCTCTACCTGATCCGCCCCGATGGCTATGTCCTGGCACGCTGGCGCGAACCGTCATGGGACGCCGTGCGCGCCACCCTTGCCCCCCTGATGC > AM260480/2887792‑2887922 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |