Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AM260479	1381136	1381233	98	4 [0]	[2] 3	h16_A1272	conserved hypothetical protein

CGGCGGCGGGGGCCGTGGCGGTGGCGGACGCGGTGGCAGGCGCTAGCGGACCAGGGAGCCTCGATCATGACGTCACCACTAAGCCTTGCCCGATCCCTGCCTGGCCGCCTGGCCTGCGCGCTGGCGCTTGCGCTCGCGCTGACCGTTGCCGG  >  AM260479/1381215‑1381366                    |                                                                                                                                     cggcggcggGGGCCGTGGCGGTGGCGGACGCGGTGGCAGGCGCTAGCGGACCAGGGAGCCTCGATCATGa                                                                                    <  1:435938/70‑1 (MQ=255) cggcggcggGGGCCGTGGCGGTGGCGGACGCGGTGGCAGGCGCTAGCGGACCAGGGAGCCTCGATCATGa                                                                                    >  2:435938/1‑70 (MQ=255)                    ggtggcggACGCGGTGGCAGGCGCTAGCGGACCAGGGAGCCTCGATCATGACGTCACCACTAAGCCTTGCCCGATCCCTGCCTGGCCGCCTGGCCTGCGCGCTGGCGCTTGCGCTCGCGCTGACCGTTGCCgg  >  2:1107775/1‑133 (MQ=255)                    |                                                                                                                                     CGGCGGCGGGGGCCGTGGCGGTGGCGGACGCGGTGGCAGGCGCTAGCGGACCAGGGAGCCTCGATCATGACGTCACCACTAAGCCTTGCCCGATCCCTGCCTGGCCGCCTGGCCTGCGCGCTGGCGCTTGCGCTCGCGCTGACCGTTGCCGG  >  AM260479/1381215‑1381366

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑