Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AY305378	156828	156850	23	3 [1]	[1] 3	PHG157	conserved hypothetical protein

GGCAGCGGCGGGGTGCTTCGATCCGCCGCCTCCTCCGCCACCGCCGCCACCCGCACCAGCGCCGGTGGTCTGCTACCGCAACGCCGCGGGGCAGAGTTGGGACGGGCAGGGCGACATGCCCGACTGGCTCAGGC  >  AY305378/156849‑156982   |                                                                                                                                    ggCAGCGGCGGGGTGCTTCGATCCGCCGCCTCCTCCGCCACCGCCGCCACCCGCACCAGCGCCGGTGGTCTGCTACCGCAACGCCGCGGGGCAGAGTTGGGACGGGCAGGGCGACATGCCCGACTGGCTCAggc  >  1:67820/1‑134 (MQ=255)   cAGCGGCGGGGTGCTTCGATCCGCCGCCTCCTCCGCCACCGCCGCCACCCGCACCAGCGCCgg                                                                       >  1:509419/1‑63 (MQ=255)   cAGCGGCGGGGTGCTTCGATCCGCCGCCTCCTCCGCCACCGCCGCCACCCGCACCAGCGCCgg                                                                       <  2:509419/63‑1 (MQ=255)   |                                                                                                                                    GGCAGCGGCGGGGTGCTTCGATCCGCCGCCTCCTCCGCCACCGCCGCCACCCGCACCAGCGCCGGTGGTCTGCTACCGCAACGCCGCGGGGCAGAGTTGGGACGGGCAGGGCGACATGCCCGACTGGCTCAGGC  >  AY305378/156849‑156982

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑