Predicted mutation
evidence seq id position mutation annotation gene description
RA AM260479 2,580,039 A→G R155R (CGT→CGC h16_A2375 ← Protein‑L‑isoaspartate carboxylmethyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*AM2604792,580,0390AG100.0% 53.2 / NA 15R155R (CGT→CGCh16_A2375Protein‑L‑isoaspartate carboxylmethyltransferase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (8/7);  total (8/7)

TGCAGCGGGCGGATGCGCTCGATCGAGAAGACCTCGCGCGCGACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCACGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGCGCGGCGTCCTCATACGCCTGCGATGCCAGTCCCGGCTCGACGAACAGGTGGCGC  >  AM260479/2579911‑2580162
                                                                                                                                |                                                                                                                           
tGCAGCGGGCGGATGCGCTCGATCGAGAAGACCTCGCGCGCGACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCgcag                                                                                                                        >  1:192409/1‑134 (MQ=255)
tGCAGCGGGCGGATGCGCTCGATCGAGAAGACCTCGCGCGCGACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCgcag                                                                                                                        >  1:286613/1‑134 (MQ=255)
                                    cgcgcgACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGAt                                                                                                               >  1:175659/1‑107 (MQ=255)
                                    cgcgcgACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGAt                                                                                                               <  2:175659/107‑1 (MQ=255)
                                                           ggCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATc                                                              >  1:732591/1‑133 (MQ=255)
                                                           ggCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATc                                                              <  2:732591/133‑1 (MQ=255)
                                                              cTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCgg                                                            >  1:223918/1‑132 (MQ=255)
                                                                 gTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAgcg                                                       <  2:192409/134‑1 (MQ=255)
                                                                                                         ggcgCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGcgcg                                                     >  1:1108040/1‑96 (MQ=255)
                                                                                                         ggcgCGTCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGcgcg                                                     <  2:1108040/96‑1 (MQ=255)
                                                                                                               tCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCg                                                                                              >  1:818760/1‑49 (MQ=255)
                                                                                                               tCGGCGGCCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCg                                                                                              <  2:818760/49‑1 (MQ=255)
                                                                                                                 ggcggcCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGccacca                                                                                                 <  1:816940/44‑1 (MQ=255)
                                                                                                                 ggcggcCAGGCCCTCGCGCAGCAGCTCGATCATGCGCGccacca                                                                                                 >  2:816940/1‑44 (MQ=255)
                                                                                                                      ccAGGCCCTCGCGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGCGCGGCGTCCTCATACGCCTGCGATGCCAGTCCCGGCTCGACGAACAGGTGgcgc  <  2:223918/134‑1 (MQ=255)
                                                                                                                                |                                                                                                                           
TGCAGCGGGCGGATGCGCTCGATCGAGAAGACCTCGCGCGCGACCTGGCTCAGCACCGCGGCCTGGTAGCCGCAGCCGGTGCCGATCTCGAGCACGCGCTCCAGCGGCGCGTCGGCGGCCAGGCCCTCACGCAGCAGCTCGATCATGCGCGCCACCACCGACGGCTTGGAAATGGTCTGCTGGTGGCCGATCGGCAGCGCGGCGTCCTCATACGCCTGCGATGCCAGTCCCGGCTCGACGAACAGGTGGCGC  >  AM260479/2579911‑2580162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: