New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AM260479	= 157815	15 (0.580)	3 (0.130) +TGGCCGAGGGC	3/192	2.1	20.5%	coding (797/999 nt)	h16_A0144	probable extra‑cytoplasmic solute receptor
	?	AM260479	157908 =	11 (0.430)					coding (704/999 nt)	h16_A0144	probable extra‑cytoplasmic solute receptor

TCGGGCGTCTTCAGCGCCTTGACCAGCTCGGCATTCAGGCGCGTGACCACGGCCTTGGGCGTGCCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/157746‑157815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGTGGCCACGCCGAGCGCGCGCAGCTTGCCCGCCTGCACGTTCTGCTGGCCCGAGGCCAGGTCCAGGAACATCAGGTCGACCTGGCCCGCGAGCAGGTCCTGCACCGCCGGCGCCGCGCCCTTGTA  >  AM260479/157908‑158035                                                                       |||||||||||                                                                                                                                 TCGGGCGTCTTCAGCGCCTTGACCAGCTCGGCATTCAGGCGCGTGACCACGGCCTTGGGCGTGCCGACCGTGGCCGAGGGCGGCGTGGCCACGCCGAGCGCGCGCAGCTTGCCCGCCTGCACGTTCTGCTGGCC                                                                             >  1:299617/1‑134                        CAGCTCGGCATTCAGGCGCGTGACCACGGCCTTGGGCGTGCCGACCGTGGCCGAGGGCGGCGTGGCCACGCCGAGCGCGCGCAGCTTGCCCGCCTGCACGTTCTGCTGGCCCGA                                                                          >  1:455897/1‑114                        CAGCTCGGCATTCAGGCGCGTGACCACGGCCTTGGGCGTGCCGACCGTGGCCGAGGGCGGCGTGGCCACGCCGAGCGCGCGCAGCTTGCCCGCCTGCACGTTCTGCTGGCCCGA                                                                          <  2:455897/114‑1                                                                            GAGGGCGGCGTGGCCACGCCGAGCGCGCGCAGCTTGCCCGCCTGCACGTTCTGCTGGCCCGAGGCCAGGTCCAGGAACATCAGGTCGACCTGGCCCGCGAGCAGGTCCTGCACCGCCGGCGCCGCGCCCTTGTA  <  2:299617/134‑1                                                                       |||||||||||                                                                                                                                 TCGGGCGTCTTCAGCGCCTTGACCAGCTCGGCATTCAGGCGCGTGACCACGGCCTTGGGCGTGCCGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AM260479/157746‑157815 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GGCGTGGCCACGCCGAGCGCGCGCAGCTTGCCCGCCTGCACGTTCTGCTGGCCCGAGGCCAGGTCCAGGAACATCAGGTCGACCTGGCCCGCGAGCAGGTCCTGCACCGCCGGCGCCGCGCCCTTGTA  >  AM260479/157908‑158035

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.