| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AM260480 | = 1370921 | 5 (0.180) | 5 (0.200) | 5/198 | 1.7 | 51.0% | coding (285/645 nt) | eda | 2‑Keto‑3‑deoxy‑6‑phosphogluconate aldolase |
| ? | AM260480 | = 1370971 | 5 (0.200) | coding (335/645 nt) | eda | 2‑Keto‑3‑deoxy‑6‑phosphogluconate aldolase | |||||
GTGGCGGCAGCCTTGCCGCAGGCCTGCGTCGGAGCCGGCACGGTGCTGAACGTCGAGCAGCTGCACGCCGTGCGCGATGCGGGCGCGCAGTTTGCCGTCTCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/1370814‑1370921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggcAGCAGCGAGATGCCCGCGCCCTGCGCGCCCTCGGCCAGCGCCGGGGTCAGGCCGGGCGAGACGGCAAACTGCGCGCCCGCATCGCGCACGGCGTGCAGCTG < AM260480/1370971‑1370871 GTGGCGGCAGCCTTGCCGCAGGCCTGCGTCGGAGCCGGCACGGTGCTGAACGTCGAGCAGCTGCACGCCGTGCGCGATGCGGGCGCGCAGTTTGCCGTCTCGCCCGGCAGCAG > 1:945241/1‑113GTGGCGGCAGCCTTGCCGCAGGCCTGCGTCGGAGCCGGCACGGTGCTGAACGTCGAGCAGCTGCACGCCGTGCGCGATGCGGGCGCGCAGTTTGCCGTCTCGCCCGGCAGCAG < 2:945241/113‑1 GATGCGGGCGCGCAGTTTGCCTTCTCGCCCGGCAGCAGCGAGATGCCCGCGCCCTGCGCGCCCTCGGCCAGCGCCGGGGTCAGGCCGGGCGAGACGGCAAACTGCGCGCCCGCATCGCGCACGGCGTGCAGCTG < 2:132904/134‑1 CGCAGTTTGCCGTCTCGCCCGGCAGCAGCGAGATGCCCGCGCCCTGCGCGCCCTCG > 1:278417/1‑56 CGCAGTTTGCCGTCTCGCCCGGCAGCAGCGAGATGCCCGCGCCATGCGCGCCCTCG < 2:278417/56‑1 CGGCAGCAGCGAGATGCCCGCGCCCTGCGCGCCCTCGGCCAGCGCCGGGGTCAGGCCGGGCGAGACGGCAAACTGCGCGCCCGCATCGCGCACGGCGTGCAGCTG > 1:656083/1‑105 CGGCAGCAGCGAGATGCCCGCGCCCTGCGCGCCCTCGGCCAGCGCCGGGGTCAGGCCGGGCGAGACGGCAAACTGCGCGCCCGCATCGCGCACGGCGTGCAGCTG < 2:656083/105‑1 GTGGCGGCAGCCTTGCCGCAGGCCTGCGTCGGAGCCGGCACGGTGCTGAACGTCGAGCAGCTGCACGCCGTGCGCGATGCGGGCGCGCAGTTTGCCGTCTCGCCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AM260480/1370814‑1370921‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccggcAGCAGCGAGATGCCCGCGCCCTGCGCGCCCTCGGCCAGCGCCGGGGTCAGGCCGGGCGAGACGGCAAACTGCGCGCCCGCATCGCGCACGGCGTGCAGCTG < AM260480/1370971‑1370871 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |